Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02239 ATGCTTATGTATATTTTTTTTCTAGCATCTTTTATTGATGCATTGGCTCCGGCAAAACTTGAAGGAATTCTCATGAGCCACCCTTCCATTGAAGATGCAGCTGTTGTTCTGCAAAAAGATGATGTAGCTGGTGAAGTTCCAGTTGCTTTTGTGGTGAGGTCATCAAATGATCCTATTACTGAAGATGCTGTCAAGGACTTTATAGCTAAACAGGTAGTATTTTACAAGAGGCTATATAAAGTAATTTTCATTGACGCAATTCCAAAATCTTCAATTGGCAAGATATTAAGAAAAGAACTCAAGAGTGGCACTTATTACGGAGCCCCTGTTTATGATGGTTATGGATATGCATTGCCTCCTCCTCATGATCCAAGCATATATGCTGCTGCCTACGCTGCTTACCCTATCTGA 411 0.3893 MLMYIFFLASFIDALAPAKLEGILMSHPSIEDAAVVLQKDDVAGEVPVAFVVRSSNDPITEDAVKDFIAKQVVFYKRLYKVIFIDAIPKSSIGKILRKELKSGTYYGAPVYDGYGYALPPPHDPSIYAAAYAAYPI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02239 136 Gene3D - 13 104 IPR045851 -
Arst6g02239 136 Pfam AMP-binding enzyme C-terminal domain 19 94 IPR025110 -
Arst6g02239 136 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 101 - -
Arst6g02239 136 SUPERFAMILY Acetyl-CoA synthetase-like 16 102 - -
Arst6g02239 136 FunFam 4-coumarate--CoA ligase 2 12 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02239 Arst-Chr6 63986474 63989374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02239 15 100 Monolignol Biosynthesis Gene Families AT4G05160 61.628 1.14e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02239 K01904 - adu:110272335 251.521