Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02178 ATGGAGTCACCTACAAATGGAGTAGTAGAGTCTTTATCAGAGGCTCAGAATTCAGTTTCTGTTGCACAGCAGCATGTTGGGGTTTTTGATGTACCTCTAATCACTCCAGTCCCTATTTGTAGCGAAACATGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTTAAACCGGAAAACGTGTTGGTGAGGGAAGACGGTCATATAATGCTGTCGGACTTCGATCTCTCTCTAAGGTGTGCAGTCAGTCCTACTGTTGTAAAGTCCACAAACTCTTTCTTGGAAATGAAAACCTCAGGATATTGTGTTCAGCCGGCCTGCATTGAGCCGACTTGCGTGATGCAGCCGGACTGCATCCAGCCTTCATGTTTTACGCCACGCTTTCTTAAAGGGAAGTCGAAGAAGAAAGAAAAGAAGTCAAAACAAAAGAATGATGTGCATAATCAGGTGACTCCTCTCCCTGAGCTCATCGCCGAGCCCACGAATGCGAGATCAATGTCATTTGTAGGAACACACGAATACTTGGCACCCGAAATAATCAAAGGTGAAGGACATGGTAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTTGGTAGAACACCATTCAAAGGCTCAGCAAACAGAGCAACTCTGTTTAATGTTGTTGGCCAGCCCTTAAGGTTCCCAGAAACCCCTACAGTAAGCTTTGCAGCCAGGGACTTAATCCGGGGTTTACTCGTGAAAGAGCCGCAGAATCGGCTGGCCTATCGACGCGGAGCGACAGAGATAAAACAACATCCGTTCTTTCATAATGTTAACTGGGCGCTGATCCGCTGTGCGAGTCCTCCAGAGGTGCCAAGGCAGGCCATGAAGGCCCTCGCAGCGGAAAAGCCGCCTGGTGTCAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 972 0.4671 MESPTNGVVESLSEAQNSVSVAQQHVGVFDVPLITPVPICSETWFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSTNSFLEMKTSGYCVQPACIEPTCVMQPDCIQPSCFTPRFLKGKSKKKEKKSKQKNDVHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPETPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCASPPEVPRQAMKALAAEKPPGVKPSGNYLDIDFF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02178 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 62 74 IPR008271 GO:0004672|GO:0006468
Arst6g02178 323 ProSiteProfiles Protein kinase domain profile. 1 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g02178 323 SMART serkin_6 5 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g02178 323 FunFam Serine/threonine-protein kinase OXI1 40 93 - -
Arst6g02178 323 FunFam Serine/threonine-protein kinase AGC1-7 172 297 - -
Arst6g02178 323 PANTHER FLIPPASE KINASE 1-RELATED 44 302 - -
Arst6g02178 323 Gene3D Transferase(Phosphotransferase) domain 1 173 297 - -
Arst6g02178 323 Pfam Protein kinase domain 43 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g02178 323 Pfam Protein kinase domain 176 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g02178 323 SUPERFAMILY Protein kinase-like (PK-like) 42 299 IPR011009 -
Arst6g02178 323 Gene3D Transferase(Phosphotransferase) domain 1 42 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02178 Arst-Chr6 56079960 56081659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02178 45 323 AGC Kinase Gene Family AT3G27580 73.913 1.05e-157 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Arst6g02178 Pkinase 2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02178 K08286 - adu:107493855 649.432