Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02161 ATGGCCGAAGAAAATGCGGAAGCTGACGTCGTTAGGGTTATTAAAGCGGCAGGAGAGCCCTCGTGGCCGATGCGTCTACCATTACCAAATGATCTCCTCCCCAATGCTAGCAACTATATTTACATCACAGTCTCCGACGGGTCAGACCGTACTTACAAGATTGCATGCAGCCCCAAGGGGCGGAAAGCGATCACTCTCGGGAGGGGATGGCAAAGGTTTTACCATGAATACAAGCTACAACCTTCTAACATTCTGCTGTTCAAGCACAAGGGCAGGGACGACTTCAGCGTTCGCATCTTTCAGTCGTTGGGTGTAGAGAGGACGTATGTTACGTCCGGTGGCGACTCTGACGACATGACAACCCCCCAGGTGCAAAGGAACCGTCCAGGCGCTCCTCCAATGCCCCAACATCAAACGGGTTGCATCAATGTCCCCAGGAGCGCCGCTGCAGCCGAGGTGGAGCAGACATTTCGTTCCGAGCACCCCTTCTTCACCATGTATATCACAAAAAGGCTGTTGGGCCTCCACTTCCTAGTAATGGCTTTTCCTCTCTACTAA 558 0.5269 MAEENAEADVVRVIKAAGEPSWPMRLPLPNDLLPNASNYIYITVSDGSDRTYKIACSPKGRKAITLGRGWQRFYHEYKLQPSNILLFKHKGRDDFSVRIFQSLGVERTYVTSGGDSDDMTTPQVQRNRPGAPPMPQHQTGCINVPRSAAAAEVEQTFRSEHPFFTMYITKRLLGLHFLVMAFPLY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02161 185 MobiDBLite consensus disorder prediction 111 127 - -
Arst6g02161 185 Pfam B3 DNA binding domain 41 101 IPR003340 GO:0003677
Arst6g02161 185 MobiDBLite consensus disorder prediction 111 137 - -
Arst6g02161 185 Gene3D - 14 103 IPR015300 -
Arst6g02161 185 SUPERFAMILY DNA-binding pseudobarrel domain 40 101 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02161 Arst-Chr6 53574706 53575366 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst6g02161 B3 2.9e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02161 - - adu:107493878 383.259