Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02154 ATGAACCTTAACATTCCCACTTTCTTTTGTGTTGAAGTAAAAAGCGGAGAAACTCTCGAGGTTGATCCGGGATATGGCAAGATGATCCATCTTTCAATGGCATGCCTGGGTGAGGTTAAGAAGGATAAAGGCGAACCAGTGACTGTGTATGTGAAATTTGGTGACCAGAGGCTTGTGATTGGAACACTTACTTCTGAGAACTTTCCTCAGATTTCTTATGATTTAATATTTGAGAAGGAATTTGAGCTATCACATAACTGGAAAAATGGGAGTGTCTTCTTTACTGGATATAAAGCTGAACCTCCTTTGGAATCTGAAAATGAAGAAGACTCTGAAGAGTTCGAAGATATTCCAGTTGCTGCTGCCAATGGAAATTCTGAGCTTGAGGTAAAGAATGCTGTCAAACTTGATGCCAATGAAGCTAAACAAAAGGAGAAAATAGGGGATCCAAGAAAGAAAGAGAAAGCAAATGAAAAGGATGCAAATGGTGAAGATGAGGAAGATTCATCTGATGCTGACTCTGATGAATCTGATGAGGATTCTAGTGAAGATGAGGCCATGGCAAATGGTGAGAAAGGTGGTGAAGGTGAAGATGACTCTGATGATGATGATGACAAGGACGAAGATGATGACGATGACGATGACGATGAATCTGACAAGGAGGAGACACTCAAGAAGGCTGAATTGAGCAAAAAGAGGGTTCATGAATCATCCAAGAAAACACCTGTTCCAGAGAAGAAGGCAAAATTTGTTACTCCTGAAAAGATTGACAACAAGGGTGGTGTTCATGTTGCAACTCCTTACCCAACTAAGCAGGCTATCAAGGCAGCTGCCAATAACAGGCAACCGGTGAAGCAGCAGACTCCAAAGTTAGTTGGAGACTATGGCTGCAAGGATTGCAACAGGTTGTTTAAGACAGAAGATGCCTTAAACTCCCATAACAAGGCCAAGCACAGTGCTAAGTGA 966 0.4182 MNLNIPTFFCVEVKSGETLEVDPGYGKMIHLSMACLGEVKKDKGEPVTVYVKFGDQRLVIGTLTSENFPQISYDLIFEKEFELSHNWKNGSVFFTGYKAEPPLESENEEDSEEFEDIPVAAANGNSELEVKNAVKLDANEAKQKEKIGDPRKKEKANEKDANGEDEEDSSDADSDESDEDSSEDEAMANGEKGGEGEDDSDDDDDKDEDDDDDDDDESDKEETLKKAELSKKRVHESSKKTPVPEKKAKFVTPEKIDNKGGVHVATPYPTKQAIKAAANNRQPVKQQTPKLVGDYGCKDCNRLFKTEDALNSHNKAKHSAK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02154 321 FunFam Histone deacetylase HDT1 7 102 - -
Arst6g02154 321 MobiDBLite consensus disorder prediction 163 185 - -
Arst6g02154 321 MobiDBLite consensus disorder prediction 195 219 - -
Arst6g02154 321 MobiDBLite consensus disorder prediction 122 265 - -
Arst6g02154 321 Gene3D Nucleoplasmin core domain 3 101 - -
Arst6g02154 321 MobiDBLite consensus disorder prediction 133 162 - -
Arst6g02154 321 MobiDBLite consensus disorder prediction 220 256 - -
Arst6g02154 321 Pfam C2H2-type zinc finger 295 319 - -
Arst6g02154 321 ProSiteProfiles Zinc finger C2H2 type domain profile. 295 321 IPR013087 -
Arst6g02154 321 Pfam Nucleoplasmin-like domain 8 97 IPR041232 -
Arst6g02154 321 ProSitePatterns Zinc finger C2H2 type domain signature. 297 318 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02154 Arst-Chr6 53114271 53118165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02154 8 99 C2H2 Transcription Factor Family AT5G03740 51.087 9.22e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst6g02154 NPL 3.7e-10 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02154 - - ccaj:109796568 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02154 6 53114271 53118165 Arst6g02154 6 53114271 53118165 ECH