Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02142 ATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGACAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACTAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCCAATCGTTGTATAACTTTCACTGATAGAGTTCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGGGGTATATTGCATTCCAGAAGAGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTATAACCACATCGATCGCTATCATCGGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTCTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTTCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGAAAAAGTCCAAAAGCAATAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTGCCTGATGCGACCCATCGGTTATGCGGATGGCATCTACAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAGTGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCAGACATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGAAGTACCTGGATGGAAAAGATGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAGTTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACTTTGGACAAGGTAGAGTTTAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCATGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTTGAAAACATACTTGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAAAATGCAAAGAACGAATTTATTAGCACAGAAATGCCTGTGAATGATGTCATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCATTGGCATTGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCCTTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGATCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATTTGATGCAGCATAGTGTGGAAGGTAACCCTCGCGATCGATCATACGGCAATGCATCAGCCAAGGACTCAAGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCGAGGTCGTTCTCAATTAAGTCCGAACACCACTCAGGACCTAATACCAAGCGTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTCGAGGTGAAGGAGTCACAGCAGGACAAGATACATTCATTCACGAACTATGAATGCGATAATGATGTCATTGATGATAAATGTGACACACGACATGTGCAGATCGATGTCCGAGATCAGTTACCATCGTCACTGCCTTGTGGCAACAAACAAGGATCGTACATGGCATTGTTCGCGTCGATGCATAGGACACTTTGA 2355 0.434 MRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRVKLDYGCGRWKVSCFVESHNHDLTPPQFAHLVPANRCITFTDRVQVENLHNFGVKSCHIMGYIAFQKSGYRHAGFTRKDLYNHIDRYHRAKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGFGLLSDETTETYKWLLETFVEAMGGKSPKAIITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLRDFKCLIYDNNDQRDFDQTWAAILDKHNLVGSTWMEKMYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYERSASCYFTRNIFKEIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPCSHIFCAMKFENILEFPDSLIYKRWTKNAKNEFISTEMPVNDVIERVLKFRVGALALNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRSCSNCHKYGHYYKRCPDLMQHSVEGNPRDRSYGNASAKDSSFSPERFANSSRSFSIKSEHHSGPNTKRFKKGGTRKFTATGMRNRKGKDNTFVEVKESQQDKIHSFTNYECDNDVIDDKCDTRHVQIDVRDQLPSSLPCGNKQGSYMALFASMHRTL 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02142 784 ProSiteProfiles Zinc finger SWIM-type profile. 477 513 IPR007527 GO:0008270
Arst6g02142 784 MobiDBLite consensus disorder prediction 649 699 - -
Arst6g02142 784 ProSiteProfiles Zinc finger CCHC-type profile. 629 644 IPR001878 GO:0003676|GO:0008270
Arst6g02142 784 Pfam MULE transposase domain 200 294 IPR018289 -
Arst6g02142 784 Pfam FAR1 DNA-binding domain 9 78 IPR004330 -
Arst6g02142 784 PANTHER OS01G0519700 PROTEIN 5 538 - -
Arst6g02142 784 MobiDBLite consensus disorder prediction 654 687 - -
Arst6g02142 784 SMART 26again6 488 515 IPR006564 GO:0008270
Arst6g02142 784 SUPERFAMILY Retrovirus zinc finger-like domains 615 647 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02142 Arst-Chr6 52168123 52170857 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst6g02142 MULE 1.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02142 - - ahf:112755379 1542.71