Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02138 ATGTCTATAAAGGAGGATGATGTTAATAATGATTCTGATAATGATTTGGGTGTTGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCTCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTAGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATAGATTTGTAATGAGGAAGCACGGCGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGATAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGATACCGGCCAATCGTCGTCTCACTGTGACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGGGGTATATTGCATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGCAAAAGTTAAAAACGAGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCACTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCGGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTGCCTGATGCGACCCATCGGTTATGCGGCTGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGTGATTTTAAGGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAGAAGATGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCTTTAAAGGAGTATAGAAACAAAGAATTAATAGCTGACTTTAAGTCTCAATGCTCAGAGCCTGTGATGATTACCTCATTGGAGGTATATGAAAGATCTGCATCATGTTATTTCATGCGAAACGTTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTTTGGGAGACCCGGCCAAAGATCGCCGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGATATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCAAGTTGGAGCGTTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCAGCAACGATCCATTCGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGGAAGGTAACCCTCGCGATCGATCATACGGCAATGCATCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCAAGGTCGTTCTCAATTAAGTCCGAACATCACTCAAGACCTAATACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGGTGAAGGAGTCACAGCAGGACAAGATACATTCATTCACGAACTATATGCGTTAA 2475 0.4331 MSIKEDDVNNDSDNDLGVDFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHRFVMRKHGVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRIKLDYGCGRWKVSCFVESHNHDLTPPQFAHLIPANRRLTVTDRVQVENLHNFGVKSCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYRRAKVKNEDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNDQRDFDRRWAAILDKHNLVGSTWMEKMYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNKELIADFKSQCSEPVMITSLEVYERSASCYFMRNVFKEIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPCSHIFCAMKFENILEFPDSLIYKRWTKNAKNEFISTDMPVNDDIERVLKFQVGALASNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEGSNDPFVVKSKGAPSKRSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGNPRDRSYGNASAKDSGFSPERFANSSRSFSIKSEHHSRPNTKPFKKGGTRKFTATGMRNRKGKDNTFVEVKESQQDKIHSFTNYMR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02138 824 PANTHER OS01G0519700 PROTEIN 58 622 - -
Arst6g02138 824 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Arst6g02138 824 MobiDBLite consensus disorder prediction 1 42 - -
Arst6g02138 824 ProSiteProfiles Zinc finger SWIM-type profile. 563 599 IPR007527 GO:0008270
Arst6g02138 824 ProSiteProfiles Zinc finger CCHC-type profile. 715 730 IPR001878 GO:0003676|GO:0008270
Arst6g02138 824 MobiDBLite consensus disorder prediction 22 39 - -
Arst6g02138 824 MobiDBLite consensus disorder prediction 739 799 - -
Arst6g02138 824 MobiDBLite consensus disorder prediction 681 703 - -
Arst6g02138 824 SUPERFAMILY Retrovirus zinc finger-like domains 701 733 IPR036875 GO:0003676|GO:0008270
Arst6g02138 824 SMART 26again6 574 601 IPR006564 GO:0008270
Arst6g02138 824 Pfam MULE transposase domain 286 380 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02138 Arst-Chr6 52032898 52035766 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst6g02138 MULE 3.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02138 - - ahf:112755379 1616.28