Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02118 ATGGTCCTCAAGACGGAACTTTGCCGCTTTAGTGGCGCCAAGATCTACCCTGGGAAGGGCATCAGATTCGTTCGTGGTGATTCTCAGGTCTTTCTGTTTTCAAACTCGAAATGCAAAAGGTATTTCCACAATCGTTTGAAGCCATCAAAGCTCACATGGACTGCCATGTATAGGAAGCAACACAAAAAGGACATTGCTCAAGAAGCTGTGAAGAAGAAGCGTCGTGCTACCAGGAAGCCATACTCTAGGTCAATTGTTGGTGCTACCTTGGAAGTTATCCAGAAGAGAAGAACCGAGAAGCCTGAAGTTAGAGATGCAGCAAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAGACAAAAGATGAGAAAAAGGCTATGAAGGCAGAGGTATCGGCTAAGCAACAAAAGGCACAGGGCAAAGGCCATGTTACAAAGGTTGCTGCACCGAAAGGTCCCAAACTTGGTGGAGGAGGTGGCAAACGCTGA 495 0.4667 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFSNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKKRRATRKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAMKAEVSAKQQKAQGKGHVTKVAAPKGPKLGGGGGKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02118 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Arst6g02118 164 MobiDBLite consensus disorder prediction 121 164 - -
Arst6g02118 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Arst6g02118 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Arst6g02118 164 SMART 4TRASH 8 46 IPR011017 -
Arst6g02118 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Arst6g02118 164 Coils Coil 112 139 - -
Arst6g02118 164 FunFam 60S ribosomal protein L24 3 64 - -
Arst6g02118 164 Gene3D - 69 148 - -
Arst6g02118 164 PANTHER 60S RIBOSOMAL PROTEIN L24 4 154 IPR000988 -
Arst6g02118 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02118 Arst-Chr6 49614231 49615832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02118 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 82.803 2.63e-86 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02118 K02896 - rvl:131300223 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02118 6 49614231 49615832 Arst6g02118 6 49614231 49615832 ECH
Arst6g02118 6 49614231 49615832 Arst6g02118 6 49614231 49615832 PCT