Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02044 ATGGATCAGTCTCCGCTCGTTCCAGCTGAGGTGCCGGATTTCATTGGCGGCGGTGGCGGCGGCAGCAGCAACACGAGGAACGTTTCCATGGTGAACGGTTACATTGTTTATACCAGAGCTAATATGGGACACCGGAATTTATGTAACGAAATTTCCAATACCAATGAATCTAAGAAATTCAGGATTCGCGAAGACGTAGAACCGAATGCCAAGCTTCCAATGAAAGAAAATAACGGAACAAAAATTTTGGCGGGAAAGAAGAACAAGTGTTCCGAACCGAAATGCGAGCTCAGCGTTTCGATGGTTAGGCCATTTAAGCGGTTTACACGACGGTCGGCGGCACTGGAAGGGAAAGTCGTTTCGAATGATGTTGGTGGAGAGGTGAGCGGGATATCGAGGAACAAGTTGGAAATGAAGATGTCGAAGAAGATTGTGGTCAACAAGACGCCCATGACGGTGAAGGAGCTCTTCCACACTGGTCTTCTTGATGGGGTCTCGGTGGTTTACATGGGCGGTATTAAGAAGGCTTCAGGATTACGGGGTGTTATAAGAGATCTGGGAATATTGTGCTCATGCTCTCTGTGCAATGAACGCAGGATTATTCCGCCTTCCAAATTCGAGGTCCATGCTTGTGGACAATACAGGAGAGCAGCAGAGTATATCTGCCTTGAAAATGGGAAGAGCTTGCTTGATCTATCGAGAACGTGCAGGGGAGTTCCTCTGTATGATTTGGAGGCGACAGTTCAAAACTTTCTTCGTTCTCCGCATGAAGAAAAACATTTTACTTGTAAAAGATGCAAAGGGTGTTTCCCTTTCTCATGTGCGGCAAGAGTGGGGCCCATATGCTGTTATTGTGTTGAATCGAGGAAATCCGAAGACAGTTCTGATAAGGCAGTTAGCAAGAGAGTCAGGTCCCCCAGACCAATGTCTGTCTCCAATCCATCCAATGCTCCTGAGCTGTCTATTGCTTCAGAAAATAAAAGAAAAAGGAAAAAAAGAACAAAGTCATCAAAATGGGCTAACAAGTCAAAGTCTTCCAAGAGTGCTTCTATTCCTATTCTACCAAAGACGACGACTTCATGGAAGATGAGAAAGAAGAAGCTGTCAGGAAACTCGGAGATTCTGGAAGTTACTTCAAATGCTAAGTGTTTATCCCCACAAAATAAGAGCCAATGGAAAATAACTAAGAAGGATCAGCGGTTGCATAAGTTAGTTTTTGAAGAGAATGGATTACCTGATGGAACTGAAGTTGCTTATTATGCCCGTGGGAAGAGATTGCTTGAAGGCTTTAAAATGGGCTCTGGAATTGTTTGCAGATGCTGCGACTCTGAGGTCAGCCCTTCACAGTTTGAGGCCCATGCAGGTTGCGCTTCTCGCAAGAAACCTTATGCTTACATTTATACATCAAATGGTGTATCTCTCCATGAGTTAGCAATATCTCTCTCCAAAGATCGAAAATATTCGGCAACAGATAACGATGATCTATGCATTGTTTGTTGGGATGGTGGAAATTTGTTGCTTTGTGATGGATGCCCAAGAGCATTTCATAAAGAATGTGCATCTCTATCAAGTATTCCACGCGGTGACTGGTATTGTGAATTTTGCCAAAACATGTTTCAGAGAGAGAAGTTTGTGGCGTACAATTCCAATGCTGTTGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATCCAAGCAATAACAAACAGATGCATACGCATAGTCAAAGATGTTGAAGCTGACCTTGGTGCATGTGCTTTATGCAGAGGTGTTGACTTCAGCAGATCCGGCTTTGGCCCACGCACCATTATACTATGTGACCAGTGTGAAAAGGAATATCATGTTGGCTGTTTGAGGGAACATAAGATAGCATATTTGAAGGAATTGCCAGTGGGGAAGTGGCTTTGTTGTAATGATTGTACAAGAATACATTCTACTTTGGAGAACCTTCTGGTCATGGGTGCTGAGAGACTCCCTGAATCTCTACTGGGAATTATAAAGAAAAAGCAAGAGGAGAAAGGACTGGAACCCCTCAATGATATTGACGTAAGATGGAAGCTTCTTAATGGGAAAATTGCTTCTCGTGAAACCAGGCCATTGCTTTTGGAGGCTGTTTCAATCTTCCACGAATGTTTCAGTCCCATAGTTGATGCAATTAGTGGACGGGACTTTATTTCAGCCATGGTTTATGGAAGGAATATTCGGGGGCAGGAGTTTGGAGGAATGTATTGTGCAGTATTAATGGTCAATTCATATGTGGTATCTGTGGGCATGCTTCGAATTTTTGGCAAAGATATTGCCGAACTCCCCTTGGTTGCAACCACTAACAAGGACCACGGAAAGGGTTACTTCCAAACACTCTTCTCTTGCATTGAGAGGCTGCTTTCTTTCTTGAATGTGAAGAACCTTGTGCTACCAGCTGCAGAAGAAGCAGAATCGATATGGACAAATAAATTTGGATTTAGCAAGATGATACCAGACCAGCTTATCAGCTACAGAAAGAATTGCCATCAGATGGTGACATTCAAAGGTACAAATATGCTTCATAAAACGGTGCCTCCCTGTCGGATCATCCCCAATCAACCATGGCAATCTGATATTTAA 2601 0.4364 MDQSPLVPAEVPDFIGGGGGGSSNTRNVSMVNGYIVYTRANMGHRNLCNEISNTNESKKFRIREDVEPNAKLPMKENNGTKILAGKKNKCSEPKCELSVSMVRPFKRFTRRSAALEGKVVSNDVGGEVSGISRNKLEMKMSKKIVVNKTPMTVKELFHTGLLDGVSVVYMGGIKKASGLRGVIRDLGILCSCSLCNERRIIPPSKFEVHACGQYRRAAEYICLENGKSLLDLSRTCRGVPLYDLEATVQNFLRSPHEEKHFTCKRCKGCFPFSCAARVGPICCYCVESRKSEDSSDKAVSKRVRSPRPMSVSNPSNAPELSIASENKRKRKKRTKSSKWANKSKSSKSASIPILPKTTTSWKMRKKKLSGNSEILEVTSNAKCLSPQNKSQWKITKKDQRLHKLVFEENGLPDGTEVAYYARGKRLLEGFKMGSGIVCRCCDSEVSPSQFEAHAGCASRKKPYAYIYTSNGVSLHELAISLSKDRKYSATDNDDLCIVCWDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCEFCQNMFQREKFVAYNSNAVAAGRVEGVDPIQAITNRCIRIVKDVEADLGACALCRGVDFSRSGFGPRTIILCDQCEKEYHVGCLREHKIAYLKELPVGKWLCCNDCTRIHSTLENLLVMGAERLPESLLGIIKKKQEEKGLEPLNDIDVRWKLLNGKIASRETRPLLLEAVSIFHECFSPIVDAISGRDFISAMVYGRNIRGQEFGGMYCAVLMVNSYVVSVGMLRIFGKDIAELPLVATTNKDHGKGYFQTLFSCIERLLSFLNVKNLVLPAAEEAESIWTNKFGFSKMIPDQLISYRKNCHQMVTFKGTNMLHKTVPPCRIIPNQPWQSDI 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02044 866 Pfam Tify domain binding domain 433 479 IPR032308 -
Arst6g02044 866 Pfam Tify domain binding domain 181 234 IPR032308 -
Arst6g02044 866 MobiDBLite consensus disorder prediction 1 22 - -
Arst6g02044 866 MobiDBLite consensus disorder prediction 341 356 - -
Arst6g02044 866 SMART PHD_3 583 640 IPR001965 -
Arst6g02044 866 SMART PHD_3 495 536 IPR001965 -
Arst6g02044 866 ProSiteProfiles Zinc finger PHD-type profile. 493 538 IPR019787 -
Arst6g02044 866 CDD PHD1_AIRE 495 535 - -
Arst6g02044 866 ProSitePatterns Zinc finger PHD-type signature. 496 535 IPR019786 -
Arst6g02044 866 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 580 642 IPR013083 -
Arst6g02044 866 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 481 571 IPR013083 -
Arst6g02044 866 SUPERFAMILY FYVE/PHD zinc finger 482 541 IPR011011 -
Arst6g02044 866 MobiDBLite consensus disorder prediction 296 356 - -
Arst6g02044 866 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 734 821 IPR016181 -
Arst6g02044 866 SUPERFAMILY FYVE/PHD zinc finger 574 637 IPR011011 -
Arst6g02044 866 PANTHER AUTOIMMUNE REGULATOR 92 850 - -
Arst6g02044 866 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 482 559 - -
Arst6g02044 866 MobiDBLite consensus disorder prediction 306 322 - -
Arst6g02044 866 Pfam PHD-finger 496 537 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02044 Arst-Chr6 39693610 39705401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02044 142 857 PHD Transcription Factor Family AT2G36720 53.488 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst6g02044 TDBD 3.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02044 - - gmx:100802562 1234.55