Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02006 ATGTCACAAGATTCTTGTTTGGAGGCAGCAAATACAACACTCGAGCAGTGGAAATGGACCGAAATGCAAGGCCTTGAGCTTCTTCCTGATGCTCCCATTTCCCACCATTATAATAATAAACCCAACAACACAAAACTCCTCACACACCAAATGGAAACTACTACTACTACTATTGAACCAAACAAAGATGATGATGCTCCTTCGTCTGCTACTTCTTCTTCTGGTAACGGTAGTAGTGACAGCAACAAGAACAACAAGAAGAATGAGAGTGTTCCCTCTGTTGGGTTCAGTGAGCTTTTCAGATTTGCTGATGGGTTGGATTATGTTCTAATGTCCATTGGAAGCGTTGGAGCAATCGTGCACGGTTGTTCCTTGCCACTCTTCCTTCGCTTCTTCGCTGATCTTGTCAACTCTTTTGGTTCCAATGCCAACAACTTGGACAAGATGACTCAGGAAGTCGTCAAGTATGCATTTTACTTTCTGGTAGTTGGTGCTGCTATATGGGCATCTTCATGGGCAGAGATATCTTGTTGGATGTGGAGTGGGGAGAGGCAATCAACAAGGATGAGGATCAAGTACCTTGAAGCTGCTCTCAGCCAAGACATTCAGTTTTTCGACACGGATGTTCGAACCTCCGATGTTGTAATTGCCATCAACACTGATGCCGTCATGGTCCAAGATGCCATCAGCGAGAAGGTCCATTCAATTTTCTTGTGCTTGGGAAACTTCATTCACTACATGGCCACATTTGTGTCTGGTTTTGTTGTTGGTTTCACTGCAGTCTGGCAATTGGCACTTGTGACCCTTGCCGTGGTCCCTATGATCGCAGTCATTGGCGCCATTCACACCACCACATTGGCCAAGCTCTCTGGCAAAACCCAGCAAGCTCTTTCTGAAGCTGGCAACATTGTGGAACAGACAGTTGTGCAAATTCGAGTGGTACTGGCCTTCGTCGGGGAGTCTCGAGCATTGCAGGCATACTCTTCGGCATTGAAGGTTGCCCAGAAGCTTGGCTACAAAACTGGTTTTGCAAAGGGAATGGGATTGGGTGCCACTTACTTTGTTGTTTTCTGTTGTTATGCACTTCTTCTTTGGTATGGAGGCTATCTGGTTCGCCACCACGCCACCAATGGAGGGCTTGCCATTGCCACCATGTTTGCTGTTATGATTGGTGGAATAGGTCTAGGCCAGTCTGCGCCGAGCATGGCAGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAGATTTTTCGCATAATCGATCACAAACCGCGGATAGATAAGAACAGTGAATCTGGTTTGGAGCTTGAGACAGTAACTGGACTTTTAGAGCTAAAGAATGTGAACTTTTCATATCCGTCAAGGCCAGATGTTCCGATCCTCAACGACTTCTCGTTGAGTGTGCCTGCTGGCAAGACAATAGCCTTGGTAGGTAGCAGTGGCTCTGGAAAGAGCACTGTGGTTTCCCTCATTGAAAGATTTTATGACCCAACTTCAGGACAAGTTTTTCTGGATGGCCATGACATTAAAACATTGAAGCTTAGATGGTTGAGGCAGCAGATAGGGCTAGTGAGCCAAGAGCCTGCGTTGTTCGCAACCACGATTAGAGAAAATATACTATTGGGAAGGCCTGATGCCAACCAGGTTGAGATCGAAGAAGCAGCCAGGGTAGCTAATGCTCATTCCTTCATCATCAAACTTTCTGAAGGTTACGAAACCCAGGTTGGAGAGAGAGGGATGCAACTCTCAGGAGGACAAAAACAGAGAATAGCAATTGCAAGGGCTATGCTTAAAAACCCAGCAATTCTCCTCCTGGATGAGGCAACAAGTGCATTGGATTCTGAATCAGAGAAACTGGTGCAAGAAGCCCTGGACCGGTTCATGATTGGTAGAACAACTCTTGTAATCGCGCATCGCCTCTCGACTATACGCAAAGCCGACCTTGTAGCTGTACTTCAGCAAGGAAATGTGTCTGAAATTGGAACTCATGATGAGCTCTTTTCCAAAGGAGAAAATGGAGTCTATGCAAAGCTCATAAAGATGCAAGAAATGGCTCATGAAACTGCCATGAACAATGCCAGAAAGAGTAGTGCACGGCCTTCAAGTGCAAGAAACTCGGTAAGCTCACCCATAATTGCTCGGAATTCTTCTTACGGCCGGTCACCATACTCTCGCAGGCTGTCTGATTTCTCCACCTCAGATTTCAGTCTGTCGCTCGATGCATCACATCCGAATTACAGGCTCGAAAAGCTTGCCTTCAAAGAGCAAGCAAGTTCCTTCTGGCGACTAGCGAAGATGAACTCTCCTGAGTGGCTATACGCTTTGATTGGCTCTATAGGCTCCATTGTTTGTGGATCACTTAGTGCTTTTTTCGCTTATGTTCTCAGTGCTGTCCTCAGTGTGTATTACCATCCGAATCACAAGCACATGATCACACAAATTGATAAGTACTGCTACTTGTTGATTGGCCTTTCATCAGCTGCACTTATCTTCAACACATTGCAACATTCCTTCTGGGATATTGTTGGTGAAAATCTAACAAAACGAGTGAGGGAGAAAATGCTGACGGCAGTGCTAAAAAATGAGATGGCTTGGTTTGATCAGGAGGAAAACGAGAGTGCACGGATCGCTGCTAGGCTTGCTCTTGATGCCAACAATGTTAGATCAGCCATTGGAGATCGAATTTCGGTGATAGTTCAGAACACTGCGCTCATGCTAGTTGCGTGTACTGCAGGGTTCGTCCTGCAGTGGCGTCTTGCCCTTGTCCTCATCGCCGTCTTTCCTCTTGTTGTTGCGGCCACTGTGTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGATCTGGAAGCTTCTCATGGCAAGGCCACACAGTTAGCAGGAGAAGCTATAGCCAATGTAAGAACCGTTGCAGCCTTCAATTCAGAAACCAAAATTGTTGGGCTTTTCGCTTCGAATCTCGAAATTCCACTACAACGGTGCTTTTGGAAGGGACAAATTTCTGGAAGCGGATATGGGATAGCACAGTTTGCTCTTTATGCTTCCTATGCACTTGGTCTCTGGTATGCTTCTTGGCTTGTGAAGCACGGAATCTCTGATTTCTCCAAAACCATTCGAGTGTTCATGGTCCTCATGGTCTCTGCTAATGGAGCTGCCGAAACTTTGACATTGGCTCCTGATTTCATCAAGGGAGGCCGAGCTATGAGGTCAGTCTTTGATCTCCTTGACCGGAGAACCGAAATTGAGCCGGATGATCCAGATGCCACCCCTGTTCCTGATCGTCTTCGAGGCGAAGTTGAACTTAAGCATGTGGACTTCTCTTACCCAACGCGGCCCGATATGGCTGTTTTTCGCGACCTCAGCCTTCGTGCGAGGGCGGGTAAAACTCTGGCCCTTGTGGGACCTAGTGGCTGCGGCAAGAGCTCAGTCCTTGCACTTATACAGAGATTCTATGATCCATGTTCTGGTAGAGTCATGATTGATGGAAAGGACATAAGGAGATACAATCTCAAGTCTCTAAGAAGACACATTGCTGTGGTACCTCAGGAGCCATGCTTGTTTGCGACAAGTATTTATGAAAACATTGCCTATGGACATGACGCGGCCTCTGAAGCGGAGATAGTGGAGGCTGCGACTCTTGCCAATGCTCACAAGTTCATATCTTCTCTTCCAGATGGATACAAAACATTTGTTGGGGAGAGAGGAGTTCAACTTTCTGGGGGACAAAAGCAAAGAATAGCAGTTGCTCGGGCTTTTGTGAGGAAGGCTGAGCTTATGCTTCTTGACGAAGCAACTAGTGCGCTCGACGCTGAATCCGAGAGGTCGGTTCAGGAGGCTCTAGACCGTGCCTGCTCGGGGAAAACAACCATCGTTGTTGCACACAGGCTATCAACCATCAGAAATGCCAACCTGATTGCTGTGATTGATGATGGCAAAGTAGCTGAACAAGGCTCGCATTCGCACTTGTTGAAGAATCATCCTGATGGGGTTTATGCGCGCATGATTCAATTACAAAGATTCACACATACCCAAGTCATTGAGATGGCGTCCGGTTCAAGTTCTTCAACAAGGCCAAAAGATGTCGAAAGACAAGGTTAG 4092 0.4675 MSQDSCLEAANTTLEQWKWTEMQGLELLPDAPISHHYNNKPNNTKLLTHQMETTTTTIEPNKDDDAPSSATSSSGNGSSDSNKNNKKNESVPSVGFSELFRFADGLDYVLMSIGSVGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTRMRIKYLEAALSQDIQFFDTDVRTSDVVIAINTDAVMVQDAISEKVHSIFLCLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSGKTQQALSEAGNIVEQTVVQIRVVLAFVGESRALQAYSSALKVAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHKPRIDKNSESGLELETVTGLLELKNVNFSYPSRPDVPILNDFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVFLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLSEGYETQVGERGMQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGNVSEIGTHDELFSKGENGVYAKLIKMQEMAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSIVCGSLSAFFAYVLSAVLSVYYHPNHKHMITQIDKYCYLLIGLSSAALIFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPLVVAATVLQKMFMTGFSGDLEASHGKATQLAGEAIANVRTVAAFNSETKIVGLFASNLEIPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDMAVFRDLSLRARAGKTLALVGPSGCGKSSVLALIQRFYDPCSGRVMIDGKDIRRYNLKSLRRHIAVVPQEPCLFATSIYENIAYGHDAASEAEIVEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNANLIAVIDDGKVAEQGSHSHLLKNHPDGVYARMIQLQRFTHTQVIEMASGSSSSTRPKDVERQG 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02006 1363 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 442 678 IPR003439 GO:0005524
Arst6g02006 1363 SMART AAA_5 1124 1316 IPR003593 GO:0016887
Arst6g02006 1363 SMART AAA_5 469 655 IPR003593 GO:0016887
Arst6g02006 1363 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 774 1061 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g02006 1363 FunFam ABC transporter B family member 19 1063 1085 - -
Arst6g02006 1363 CDD ABC_6TM_Pgp_ABCB1_D1_like 111 415 - -
Arst6g02006 1363 Pfam ABC transporter transmembrane region 775 1044 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g02006 1363 Pfam ABC transporter transmembrane region 113 391 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g02006 1363 FunFam ABC transporter B family member 1 98 440 - -
Arst6g02006 1363 MobiDBLite consensus disorder prediction 57 90 - -
Arst6g02006 1363 PANTHER ABC TRANSPORTER B FAMILY 77 785 IPR039421 -
Arst6g02006 1363 Pfam ABC transporter 460 609 IPR003439 GO:0005524
Arst6g02006 1363 PANTHER ABC TRANSPORTER B FAMILY 77 785 IPR039421 -
Arst6g02006 1363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1088 1336 IPR027417 -
Arst6g02006 1363 CDD ABC_6TM_Pgp_ABCB1_D2_like 763 1079 - -
Arst6g02006 1363 ProSitePatterns ABC transporters family signature. 1236 1250 IPR017871 GO:0005524|GO:0016887
Arst6g02006 1363 FunFam ABC transporter B family member 4 432 689 - -
Arst6g02006 1363 Gene3D ABC transporter type 1, transmembrane domain 158 1070 IPR036640 GO:0005524|GO:0016020
Arst6g02006 1363 Gene3D ABC transporter type 1, transmembrane domain 158 1070 IPR036640 GO:0005524|GO:0016020
Arst6g02006 1363 Gene3D - 1088 1344 IPR027417 -
Arst6g02006 1363 Gene3D - 440 705 IPR027417 -
Arst6g02006 1363 Gene3D - 440 705 IPR027417 -
Arst6g02006 1363 FunFam ABC transporter B family member 1 1087 1337 - -
Arst6g02006 1363 SUPERFAMILY ABC transporter transmembrane region 761 1084 IPR036640 GO:0005524|GO:0016020
Arst6g02006 1363 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 113 407 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g02006 1363 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1097 1333 IPR003439 GO:0005524
Arst6g02006 1363 Pfam ABC transporter 1116 1264 IPR003439 GO:0005524
Arst6g02006 1363 FunFam ABC transporter B family member 1 753 1062 - -
Arst6g02006 1363 SUPERFAMILY ABC transporter transmembrane region 98 426 IPR036640 GO:0005524|GO:0016020
Arst6g02006 1363 CDD ABC_MTABC3_MDL1_MDL2 443 681 - -
Arst6g02006 1363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 681 IPR027417 -
Arst6g02006 1363 CDD ABC_MTABC3_MDL1_MDL2 1097 1336 - -
Arst6g02006 1363 ProSitePatterns ABC transporters family signature. 581 595 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02006 Arst-Chr6 35682678 35687969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02006 87 1358 Calmodulin-binding Proteins AT2G36910 87.903 0.0 2299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02006 6 35682678 35687969 Arst6g02006 6 35682678 35687969 ECH