Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01966 ATGGTGTGCTTTCCATTCCACTATGGTGGAGAGAAGAAGGATGAACCAAAAGGCTTGAAATCAATGTCAGGTCGATCAGACTGCTCTATTTATGTGGAGGCTGAGGTTAGAAGATCTGGTTCTGAGTTGAATTCGCAGGATGTCTCGGAGAATGGCAGCTCAGATTCCCTCAGGAGGAATTCCACTCCTAGTTTCTCCCAAAGACCTAGCAACCTTAGAGTGTTCACCGTATCCGAACTCAAGTCTGCCACAAAGAATTTCAGCCGCTCGGTTATGCTTGGAGAGGGCGGGTTTGGGTGTGTCTACTATGCGTTGATCAAGAGTTTAGAGGATCCTTCCAGAAAAATTCAAGTTGCTGTTAAACAACTCAGTAAAAGGGGAATGCAGGGGCATAGAGAATGGGTCACAGAAGTGAATGTTCTTGGTGTTGTCGAGCATCCCAATCTTGTGAAACTAGTGGGATATTGTGCCGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAACACCATTTGTCTCATCGATCTGAGACTCCTCTCTCGTGGAGTAGGAGAATGAAAATAGCCCAAGATGCTGCCCGTGGATTAACATACCTACATGAGGAAATGGATTTTCAGATCATTTTCAGAGATTTCAAATCATCGAATATCCTTCTCGATGAAAAGTGGAACGCAAAGCTATCGGACTTTGGGTTAGCAAGATTGGGACCATCGGATGGACTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTATGCAGCTCCTGAATACATCCAAACCGGACGTCTGACATCAAAGAATGATGTGTGGAGCTACGGTGTCTTCCTTTACGAGCTCATTACTGGCAGGCGCCCTATCGATCGAAATCGCCCCAGGGGTGAGCAGAAGATGTTGGAATGGATAAGGCCATACCTAGCAGATGGGAAGAAATTTCAACTAATATTGGATCCAAGACTCGACAAGAAGCAAGTCTTCAAGCCAGCACAAAAACTCGCTTTAATAGCTAACCGATGCCTTGTCAGGAACCCAAAGAATCGCCCGAAGATGAGCGAGGTGTTGCAAATGGTGAATGGTTTAGTAGAGTCTTCATCTGGTGCTAGTCCACAGGTACCCTTGAAGAGTGCGGCGAAAACAAACAAAGCTTCCGAGGACAATGAAATACATAACAAGAAACGGACCATGGATATGAAATCTGGTGAGAGCAATTGGTTTGTTAGGATCTTCAGACAAAAACTGGTAAAATCATGTTGA 1287 0.4499 MVCFPFHYGGEKKDEPKGLKSMSGRSDCSIYVEAEVRRSGSELNSQDVSENGSSDSLRRNSTPSFSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYYALIKSLEDPSRKIQVAVKQLSKRGMQGHREWVTEVNVLGVVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSHRSETPLSWSRRMKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEKWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYIQTGRLTSKNDVWSYGVFLYELITGRRPIDRNRPRGEQKMLEWIRPYLADGKKFQLILDPRLDKKQVFKPAQKLALIANRCLVRNPKNRPKMSEVLQMVNGLVESSSGASPQVPLKSAAKTNKASEDNEIHNKKRTMDMKSGESNWFVRIFRQKLVKSC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01966 428 FunFam Serine/threonine-protein kinase BIK1 54 172 - -
Arst6g01966 428 Pfam Protein kinase domain 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01966 428 MobiDBLite consensus disorder prediction 374 390 - -
Arst6g01966 428 PANTHER OS01G0588500 PROTEIN-RELATED 56 369 - -
Arst6g01966 428 SUPERFAMILY Protein kinase-like (PK-like) 61 368 IPR011009 -
Arst6g01966 428 Gene3D Phosphorylase Kinase; domain 1 67 172 - -
Arst6g01966 428 Gene3D Transferase(Phosphotransferase) domain 1 173 393 - -
Arst6g01966 428 MobiDBLite consensus disorder prediction 374 398 - -
Arst6g01966 428 ProSitePatterns Protein kinases ATP-binding region signature. 93 121 IPR017441 GO:0005524
Arst6g01966 428 CDD STKc_IRAK 93 371 - -
Arst6g01966 428 MobiDBLite consensus disorder prediction 39 68 - -
Arst6g01966 428 FunFam Serine/threonine-protein kinase PCRK2 173 382 - -
Arst6g01966 428 ProSiteProfiles Protein kinase domain profile. 87 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01966 428 MobiDBLite consensus disorder prediction 38 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01966 Arst-Chr6 31305747 31309225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01966 1 383 Glycoside Hydrolase AT3G07070 39.796 9.09e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Arst6g01966 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01966 - - gsj:114400704 741.11