Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01965 ATGAATTATGGAACGAGGAAGAACATTATTATTAATAATGGCGTATTCCTCGTTTTACTACTCTCATGTTTTCTACCACGTGTTCAATCTGCGGACCCGCAGCCAACTTCTGCTATGATACCATCATTTTACACGGAAGAAATTTACAAGGAAATTGAAGCTCTTGCCACAGTTTTAACGATAGATATCAAGAAAAACCTAGGCTACTGCATTAAGGATATAAAAAAAGATTGGCTGGAAGCGTTTGATTTCAAGGGCAAGTTAGATTTCGTCGATGGCTGTGTTAAGCAAAAAGGGGATTTCAGAGATCGGATGTGCACAGCAGCGGAAATAAGGTACTACTTCAGGAGTTTGTTGCAAGGGGGTTCAGATGGGAATTATGTGAAACCAAACAGGAATTGCAACTTGACTTCATGGGTTCCTGGTTGTGAACCTGGTTGGAGTTGTAGTGCTGATGAGCCTATTGATCTCAAGAAGGATAATAAGGAGGAAATTCCTTCTAGAGTTTCAAATTCCCAACCTTGTTGTGAGGGCTTCTTCTGCCCTGAAGGCTTGACTTGCATGATAACTTGCCCCCTTGGTTCGTATTGTCCAATTTCAACACTAGATGCACAAAATGGAGTATGTAACCCATATGGTTACAAGGTCCCTGCAGGGGACAAGAATCATAGTTGTGGTAGTGCTGATACTTGGAGTAGTGCTGTCAACAATACTAACATATTCTGTGAAGCAGGACATTATTGCCCAACTACAACCCAAAAGTCTGTTTGCAATAAGGGATACTATTGCAGGGCTGGATCAACTGATCCAATTGCATGCTCCAAGTTGAGTACCTGTAATCCAGAATCTGAAAGCCAAACGATGCATGCTTATAGTGCTTTGCTCATTGTGGCTTTGAGTACACTCCTAGTCTTCATTTATAACTGTTCTGATCAAGTTCTTGCGACCCGAGAAAGAAGGCAAGCGAAATCCAGAGAACGTGCAGCAAAGCATGTCCGAGAAACGGTGCAAGCACGTGAAAGGTGGAAGATGGCAAAAGATATTGCCAAGAAGCGTACAATGGAGTCGTTGAATCGCACCTTCTCGCGAAGGAAGTCACAGAAGATGTCAGATCTTCCAAATACCATGGCAAATGTAGAGAACAACAAGGAGCCTAGCAACCTCTCGAAGATGATGGATTCCATTGAGAATGATCCCAACAGTCAGGAAGGCTTCGACGTGCAGATTGGAGATAAGAATGTGAAGAAGCAGCAGATGACAAAGGGAAAGAATCTGCATACACATAGCCAGATTTTGAGGTATGCTTATGGCCAGATTGAGAAGGAGAAAGCTCAGCAAGAGAAGAACACTAACTTGACATTCTCAGGAGTGATATCGATGGCCACCGAACAAGGAGAGGAAGTGAGAAAAAGGCCTGTGATTGAGATAGCTTTCAAGGACATAACTCTCACTTTGAAAGGGAAGAACAAGCATCTTCTGAGGTGTGTGTCCGGCAAGTTCATGCCAGGTCGAATTTCAGCTGTCATGGGACCCTCAGGGGCTGGGAAAACCACATTCCTTTCGGCTTTGGTAGGAAAAGCCAGAGGGTGCAATATAACAGGTGAAATTCTTATTAATGGAAAAAATGATTCCATTCACTGTTATAAGAAAATCACAGGTTTTGTGCCACAAGATGATATTGTCCATGGAAACTTGACAGTGGAGGAAAATCTTCGTTTTAGTGCAAGATGCAGACTATCGGCGGACTTGCCGAAAGCAGATAAGGTTTTGATTGTTGAGAGGGTAATTGAGTCCTTGGGACTTCAGCCAGTGAGGGATTCTCTAGTCGGTACAGTAGAGAAGCGAGGCATATCCGGAGGACAGAGAAAACGTGTAAATGTTGGCCTGGAGATGGTGATGGAGCCTTCCTTGTTAATCTTAGATGAGCCTACAACTGGCCTTGACAGTGCATCTTCCAGTTTGCTACTTAAGGCTCTTCGACGCGAAGCTCTCGAAGGCGTTAACATTTGCATGGTGCTTCATCAACCAAGCTATACTTTGTTTAGAATGTTTGATGATATAGTGTTTCTAGCCAAAGGTGGCCTTACTGCATACCATGGCCCTGTGAAAAATGTAGAAGAATACTTTGCCAGTATTGGGATTCCTGTGCCGGACCGTGTGAATCCTCCAGACCATTTCATTGACATTCTAGAAGGTTTGGTGAAACCGAGTGCAACAGGTGTAACTCATGAACAACTTCCTGTCAGATGGATGCTTCACAATGGATATGCAGTGCCACCAGATATGCTTCATTTTGTTGATCAAATCGCAGCGGCTTCTGGTGGCGCAACTGTGGTTCCTACAAGTCAGTCAATAAAGGTTACTGAGAATGAGCAATCTTTTTTCTCAGAGTTTTGGGAGGATTTGAGGGATAATATTCAGAGCCAACTAGATCGCCTTGAGGCGATCTTTATGACGTCAAAGGACTTATCGAACCGGAGAACTCCTAGTATAGCCAGGCAGTACAGATATTTTATTGGCCGGGTCGGTAAGCAGCGGCTGAGAGAGGCTAAATTACAAGCTGTAGACTATCTCCTTTTACTAGTTGCTGGTGCTATCTTGGGAATGCTAACTAAAGTGAATGATAACTCATTTGGCTCCCTTGGTTATACATTTACAATCATAGCCGTCTCTCTACTTTGCAAGATTGGTGCCCTAAGATCATTTTCTAATGACAAGTTAAATTACTGGAGGGAGAGCGCCTCTGGGATCAGTAGCCTGGCCCATTTTCTATCTAAAGACACAGTTGATCTTTTCAACACAATCATCAAACCGGTTGTTTTTCTATCCATGTTCTACTTTTTCAGCAATCCAAGGTCAAGCTTTGCAAGTAACTATGTAGTGTTGCTTTGTTTGGTGTACTGTGTGACTGGCATAGCTTATATATTCGCCATCTACTTCGCCTACAGTCTTGCACAGCTGTGGTCAGTGTTGCTTCCTGTGGTTATGACCCTCATTGCAAAACAAAACGACGATTCAATACTCATGCACATTATAATGAAAGTTTGCTACCCAAGATGGGCTTTGGAGGCCTTTGTCATTGCAAATGCTGAAAGGTACACTGGGGTGTGGCTAATAACACGTTGCACTTCACTGCTGGTGAGTAGGTATAATCTTGGGGACTGGGACTTTTGTCTGATTGCCCTTGTTGTTTATGGTATCGTTGCCAGAATTGTGGCCTTCTTTTGCCTTGTTATTTCCCAAAAGAGGTGA 3252 0.433 MNYGTRKNIIINNGVFLVLLLSCFLPRVQSADPQPTSAMIPSFYTEEIYKEIEALATVLTIDIKKNLGYCIKDIKKDWLEAFDFKGKLDFVDGCVKQKGDFRDRMCTAAEIRYYFRSLLQGGSDGNYVKPNRNCNLTSWVPGCEPGWSCSADEPIDLKKDNKEEIPSRVSNSQPCCEGFFCPEGLTCMITCPLGSYCPISTLDAQNGVCNPYGYKVPAGDKNHSCGSADTWSSAVNNTNIFCEAGHYCPTTTQKSVCNKGYYCRAGSTDPIACSKLSTCNPESESQTMHAYSALLIVALSTLLVFIYNCSDQVLATRERRQAKSRERAAKHVRETVQARERWKMAKDIAKKRTMESLNRTFSRRKSQKMSDLPNTMANVENNKEPSNLSKMMDSIENDPNSQEGFDVQIGDKNVKKQQMTKGKNLHTHSQILRYAYGQIEKEKAQQEKNTNLTFSGVISMATEQGEEVRKRPVIEIAFKDITLTLKGKNKHLLRCVSGKFMPGRISAVMGPSGAGKTTFLSALVGKARGCNITGEILINGKNDSIHCYKKITGFVPQDDIVHGNLTVEENLRFSARCRLSADLPKADKVLIVERVIESLGLQPVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKNVEEYFASIGIPVPDRVNPPDHFIDILEGLVKPSATGVTHEQLPVRWMLHNGYAVPPDMLHFVDQIAAASGGATVVPTSQSIKVTENEQSFFSEFWEDLRDNIQSQLDRLEAIFMTSKDLSNRRTPSIARQYRYFIGRVGKQRLREAKLQAVDYLLLLVAGAILGMLTKVNDNSFGSLGYTFTIIAVSLLCKIGALRSFSNDKLNYWRESASGISSLAHFLSKDTVDLFNTIIKPVVFLSMFYFFSNPRSSFASNYVVLLCLVYCVTGIAYIFAIYFAYSLAQLWSVLLPVVMTLIAKQNDDSILMHIIMKVCYPRWALEAFVIANAERYTGVWLITRCTSLLVSRYNLGDWDFCLIALVVYGIVARIVAFFCLVISQKR 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01965 1083 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 245 1070 - -
Arst6g01965 1083 Pfam ABC transporter 495 644 IPR003439 GO:0005524
Arst6g01965 1083 Gene3D - 463 712 IPR027417 -
Arst6g01965 1083 MobiDBLite consensus disorder prediction 367 386 - -
Arst6g01965 1083 FunFam ABC transporter G family member 24 470 712 - -
Arst6g01965 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 476 699 IPR027417 -
Arst6g01965 1083 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Arst6g01965 1083 SMART AAA_5 502 694 IPR003593 GO:0016887
Arst6g01965 1083 ProSitePatterns ABC transporters family signature. 617 631 IPR017871 GO:0005524|GO:0016887
Arst6g01965 1083 MobiDBLite consensus disorder prediction 359 386 - -
Arst6g01965 1083 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 476 717 IPR003439 GO:0005524
Arst6g01965 1083 Pfam ABC-2 type transporter 674 1082 IPR043926 GO:0140359
Arst6g01965 1083 CDD ABCG_EPDR 474 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01965 Arst-Chr6 31285120 31292501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01965 503 696 Calmodulin-binding Proteins AT2G36910 29.208 5.00e-11 65.5