Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst6g01951 | ATGAGTCATGGTGCCCCTCAGTACCACAAGGACAAGGTGGTTCGTGATCTGTCTTCTGAAACTAATAATACTTTGGAGAACGGACCTGTTATGCACAACATGATTGCTACAAAAGCTGACGTAGGGCATTCCACTTCAAGGTGTGGCGGCTCTGAACAATGTAAAGATAATACACAAACTGGTGTTCATGTAAAAGATAAAAAAGCTGTTGGAGAACTTGTATGTTTGCAGTGCTTGCATGGTAGTGAACTCATTTGCTGCTTTGGAAAAGGATGTCAAAGGAGGTACCATCCCTCTTGTTTGAATCCTCCTCTCAATTACTACCCTGTGGGCTTTTGGAATTGTGCATGGTGTGTTAAGAAAAAGCTAGATCTTGGTGCGTACTCCATTTCTGAAGGGGTGGAGTCCATCTTGGATTCTAGAGAAGGCATTTCGAAAAACAATGTGACGGAAAAGGAGTACTTTGTCAAGTATCTGGGCCTTGCTCATGCTCACAACCGCTGGATTCCAGAAACACAAATGCTTGAAGAGGGGCCAAAAGTTTTGTCAGCATTTAAGAGGAAGCGCCGGGTTATCAAGTGGAAAAAAGAATGGAGTATACCCCACCGCTTGTTGCTAAAAAGAGCAATTGTGTTACCAAAGCAAAATAAAGAACATTTAGATGGGCATGATAACAATTATTCAGTTGGCTGTTTTGAATGGCTTGTAAAGTGGTCTGGTCTTGGATATGATCATGTTACATGGGAACTAGATAGTGCTTCCTTTTTGACGTCGTCTGAAGGCATGAAACTCAAAAATGATTATGAAAGTCGTCGTCTTCAAAAGGGGATGGATGGAGACATTAATGAGGAGAGAAAAGCTTCCTTTGCTGAATTACCTGTACCGCCTTCAGGTAATTCAGTGGCAGTTTCTAGTCAGCATTTGAGTTATGTGAACAAGCTTTGCATGTGTTGGCACAAAGGTCAGAGTGCTGTCATTGTAGATGATAAGATTGACCAGGAGCGGGTTATGAAGGTGATGTCATTTATATTGTCATTGCATTGTAAGGTGACAAGGCCTTTCCTCATTGTCTCAACTTCTGCTGCTCTTGCTGTGTGGGAAAGAGAGTTCTTACATTTGGCTCCATCTGCAAATCTTGTCATTTACAAGGGAAACAAAGATGTACGGAGAAGCATAAGGACCTTGGAGTTTTATAACGATGACAATGGCATCTTATTTCAAATATTATTATCATCGTCTGATATTATCGTTGAGGACTTAAAGGAACTACAATGCATTTTGTGGGAAGCAATAATAGTTGATGAATGCCAGCGACCTAGAATTTTGGAACACCTTGACAATATCAAGATTTTGACAACAAAGTTGAGGCTCCTGGTTGTTAGCGGACAGATCAAGGATGATCGAGCTGATTATGTCAAAATGCTTTCCTTCCTCAACTCTGAAAATCATGTGTTAAATACTACTGAAACAGAGCCATTAGTCTCTGATAGCATTTCCGATTTGAAAAGCAAATTGGATCAATATGTGGCATTTAGAACAAAAACAGGGTCCACTAGGTTTGCAGAGTTTTGGGTTCCTTCCAAGCTTTCCAGTTTGCAACTTGAGCAGTATTGTTCATTGCTGCTTTCTGACAGAACTCTGCTATGCTCAGCCCAAAAGTCTGACAAGGTCAATGCTCTCCGCGGCCTCCTTAACTCAACAAGGAAGTGCTTGTTCAACCATCCCTTTCTCTTGGACTCGTCACTATATAATTCCGTCAATAAAGGTCTGTCTGTTGAAGAGCAGTTGAATATTGGGATAAAAGCAAGTGGCAAATTGCAGCTTCTTGAAAAAATCCTTTTGAAAGCAAGAAGCCGTGGTTTAAGAGTGATGATATTATTTCAGTCAACTAGTGATTTGACATCGATTGGAGATATTTTGGATGATGTACTTTGTCGGAGATTTGGCGAACATTGTTATGTACGATATGCTGCTGGGTATGCGCCCAAAGCGAAGCAAAGTGCTCTAGACAAATTTAATGATGGCGAAAGAGCATTTGTCTTCTTGTTGGAAAGTCGTGCTTGCCTCCCTAGTGTTAAGCTTTCCTCTGTTGATGCCATTATATTGTTTGACAGTGACTGGGACCCAGAAAATGATTTAAGAGTCTTACAACGTATGCCTATAAGCTCACAGTTCGAACAGTTAACGGTGTTTAGACTATACTCATCTTTTACTGTTGAAGAAAAGGTTCTAATGCTTGCAAAAGAGGGTAGTAGTATCCAGTTGGTTAACAATAGTACCTCTCATGCCCTGCTCAGATGGGGTGCCACCTATCTTTTCAGTAAGCTTGATGACTTACATGGCAGCAACACTCCAGTCTTTGCTCAAGACATTGCCTCTGATCAGTCACTTCTACATGATGTAATCTGTGAGTTATCAACCGTATTTTCTGGTGGAAGCAGTGACATTGATAATCATGGATTGTCCTTCATAGCGAGAGTATGGCAGAAAGGAGGGGAATATGCAAAGAACATTTTATTGCATGGCGAAAGAGTGATGAAGGAATTGGATGATGGTTTTGATTTTTTTTCTTGGAGTAATCTCCTTCAGGGAAGGAGTCCTAGATGGAAATTGTTGTCTGTTTCATCTCAAAGGATCAGAAAACCTGCCAATCACTTTGATCACAAAGCAAAGGAATCTGAAAGTGAAAATAATGCTGATAATAGAAAGAAGAGGAAAGTGTCTGAGGGTAACGTTGATTCCAAAAGGAAGGAAGTGTCCAAGGATACTACAGTCACAAGGAAGGGGAAAGTGCCAGATCATGCCAATTCCAAATATTTGAAAAAAAGTTTGAAGAACAAGAAGCTAAACACTAGTAATGTAGATGAGTTCTTGCCAAAGCCAGATTTAGCAGGTCTTTGTGATGTTCTACAACTTCCGAAAAATGTCAAGGCTCTTGGTGCAAGGCTTCTTGAGCACATATTGGAATATTTCAACGTTAATTGGCGAGACGTTTCTACCATGCAGGCATTTGAATTATCTGTGTGTTGGCTTGCGGCTTCGTTATTGAAGCACAATTTTGATAAGCAAGGTTCACTTGCACTTGCGAAAGTGCACTTGAACTTCAATTGCGAGGAAGAGGAAGTAACCTATGTTTACTCTAAACTGCTGAAATTTAAGAAGGAATTTTCAAGTTGTTTACAAAGTGGAATTTGTGTTGAGAAATGTACATCAGACTGCGAAACACCTGGGTTGACAGATTTGGTGGAGGATATGCAAAATGGTTTTCAGGGTCCTCTAGAATCCGACACATATAGACATGATCTTCAAAGGGAATCTCCCACAACTGTGCTAGCTACTCATTATCAGACTTGTGCAGAAAATTTTCAAATCAGACTTACAGATATTGGAAGTTGTCCTCAAAAGTCATCTGGCACTTTCCCTGCCAAAGCAGATGCTATCCCCGTGACATCCAAAGCTTCTTTCTTGGAGCATCAGAGTGAGGTCTTCGATTCAAGTGATGATCCTTGTAATGTCAACCCTGCCACTGGTTCTTTGGAAAATCAAATTAATGGCGATGATTTTGAAGTTTCTCTAATAAATAATAATGAAGTGGTTGAGACAATCACTTGCAGTACTGCTGATGTTCCTGAGGTCAACCAGCATTGCAGTGTAGTGAGTGCTGTCCATGGTGAGTCTATTATGGATTTTCCTGAGACTACTTTCCCATATATGGAACCATCAAATACAGATCTACTGCCACTGCCTCAGGAGGATGTTACATCTTTTTTGGAGAATATTTCAATTGGTGAAGTCTTGCCTTTTGATGAAATATTTTTTGAAAATTATAACCTTCATGAGGATGAACCAACATTACAAGTACCAGATGACCCACCTGAATCAGTCCCAGACCCATTGCAAATTGAAATGGAGAGAATAAAAAAGGCGACTGAAGAAGCTAACAGGATACGCCAGCAAAAATTACACCAGCTTGAGTCAGACCATGGTATGGAGGTTAAAGAATTGGTTGCAAAGTATCAAATGTTGCTTCAGAATATCAGTACTGAAGTAGCATTGCAAAAAAAGGAACTTGACGCATATTATAAAACAGTTCAAAAGAATAAGTTGTTGGCTTCTGTTTTGGATCACAATCACAAGGAATATAAAAGAGAAGCAGTTCTATTCGCAGAACAAGGCTTACCCTCTGCAATGGGAACACCTAGCTCCTCAAGTACTCAACAAAGAGAGCACCAACCCCCTCTTATGTCTGATCAAAGACTCGAACAGTGTCTACCGATGATTCCCCCACACTTGTTTACTCCAACGGAAGCGGTTAATACTCTGGAGATTGCTAACACTTCAACAGCCGTTCCAGAAATGAGCGCACCTAGAGAATGTATTGATCCCATGATTCAGTCCTATGTAAACTTGAATTACGGCTGTTATTCAATGGCCTCAAACCCCCATCTTGAAGCCTCTAATTCAGTGCCTATGATGCCAAGTCTAAGTAGTGGAATACCAGAACAGCAATTGCCACTACATTTACATCAATGGCAATATCAGTAA | 4545 | 0.4053 | MSHGAPQYHKDKVVRDLSSETNNTLENGPVMHNMIATKADVGHSTSRCGGSEQCKDNTQTGVHVKDKKAVGELVCLQCLHGSELICCFGKGCQRRYHPSCLNPPLNYYPVGFWNCAWCVKKKLDLGAYSISEGVESILDSREGISKNNVTEKEYFVKYLGLAHAHNRWIPETQMLEEGPKVLSAFKRKRRVIKWKKEWSIPHRLLLKRAIVLPKQNKEHLDGHDNNYSVGCFEWLVKWSGLGYDHVTWELDSASFLTSSEGMKLKNDYESRRLQKGMDGDINEERKASFAELPVPPSGNSVAVSSQHLSYVNKLCMCWHKGQSAVIVDDKIDQERVMKVMSFILSLHCKVTRPFLIVSTSAALAVWEREFLHLAPSANLVIYKGNKDVRRSIRTLEFYNDDNGILFQILLSSSDIIVEDLKELQCILWEAIIVDECQRPRILEHLDNIKILTTKLRLLVVSGQIKDDRADYVKMLSFLNSENHVLNTTETEPLVSDSISDLKSKLDQYVAFRTKTGSTRFAEFWVPSKLSSLQLEQYCSLLLSDRTLLCSAQKSDKVNALRGLLNSTRKCLFNHPFLLDSSLYNSVNKGLSVEEQLNIGIKASGKLQLLEKILLKARSRGLRVMILFQSTSDLTSIGDILDDVLCRRFGEHCYVRYAAGYAPKAKQSALDKFNDGERAFVFLLESRACLPSVKLSSVDAIILFDSDWDPENDLRVLQRMPISSQFEQLTVFRLYSSFTVEEKVLMLAKEGSSIQLVNNSTSHALLRWGATYLFSKLDDLHGSNTPVFAQDIASDQSLLHDVICELSTVFSGGSSDIDNHGLSFIARVWQKGGEYAKNILLHGERVMKELDDGFDFFSWSNLLQGRSPRWKLLSVSSQRIRKPANHFDHKAKESESENNADNRKKRKVSEGNVDSKRKEVSKDTTVTRKGKVPDHANSKYLKKSLKNKKLNTSNVDEFLPKPDLAGLCDVLQLPKNVKALGARLLEHILEYFNVNWRDVSTMQAFELSVCWLAASLLKHNFDKQGSLALAKVHLNFNCEEEEVTYVYSKLLKFKKEFSSCLQSGICVEKCTSDCETPGLTDLVEDMQNGFQGPLESDTYRHDLQRESPTTVLATHYQTCAENFQIRLTDIGSCPQKSSGTFPAKADAIPVTSKASFLEHQSEVFDSSDDPCNVNPATGSLENQINGDDFEVSLINNNEVVETITCSTADVPEVNQHCSVVSAVHGESIMDFPETTFPYMEPSNTDLLPLPQEDVTSFLENISIGEVLPFDEIFFENYNLHEDEPTLQVPDDPPESVPDPLQIEMERIKKATEEANRIRQQKLHQLESDHGMEVKELVAKYQMLLQNISTEVALQKKELDAYYKTVQKNKLLASVLDHNHKEYKREAVLFAEQGLPSAMGTPSSSSTQQREHQPPLMSDQRLEQCLPMIPPHLFTPTEAVNTLEIANTSTAVPEMSAPRECIDPMIQSYVNLNYGCYSMASNPHLEASNSVPMMPSLSSGIPEQQLPLHLHQWQYQ | 1514 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst6g01951 | 1514 | Pfam | SNF2-related domain | 337 | 481 | IPR000330 | GO:0005524|GO:0140658 | |
| Arst6g01951 | 1514 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 342 | 480 | IPR027417 | - | |
| Arst6g01951 | 1514 | PANTHER | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | 83 | 1440 | - | - | |
| Arst6g01951 | 1514 | ProSiteProfiles | Zinc finger PHD-type profile. | 72 | 121 | IPR019787 | - | |
| Arst6g01951 | 1514 | Gene3D | - | 210 | 262 | - | - | |
| Arst6g01951 | 1514 | SMART | PHD_3 | 74 | 119 | IPR001965 | - | |
| Arst6g01951 | 1514 | ProSitePatterns | Zinc finger PHD-type signature. | 75 | 118 | IPR019786 | - | |
| Arst6g01951 | 1514 | Gene3D | - | 133 | 193 | - | - | |
| Arst6g01951 | 1514 | SUPERFAMILY | Chromo domain-like | 230 | 254 | IPR016197 | - | |
| Arst6g01951 | 1514 | Pfam | Chromo (CHRromatin Organisation MOdifier) domain | 134 | 188 | IPR023780 | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst6g01951 | K11643 | - | gmx:100813574 | 1219.53 |
Showing 1 to 1 of 1 entries