Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01927 ATGAAGATTATTCATTCATGTTTTTCTACTTGTTTCTCTGTCAAAGAAGAAACCAAACAAGAAGAAGAGCCGAATAAGGAAGACGAGAGTGATGGAAACTTTCGGGTCTTCACCTACAGGGAGTTGGCATCAGCCACCCGTGGTTTTCATCCCTCTCACAAAATTGGAGAAGGAGGTTTTGGCTCTGTCTACAAGGGGGGGCTCCGGGATGGGACATTGGTGGCAGTGAAAGTGCTTTCCATAGAGATGGAGTCCATGCGAGGAGAGAGGGAGTTTGTGGCTGAATTGGCTACGCTTGCAAATATCAAGCACCAAAATTTGGTCATTCTTAGAGGGTGCTGTGTAGAAGGAGCAAAAAGATATCTAGTCTATGATTACATGGAGAACAACAACCTTCACCACACTTTCTTAGGTTCGGAGGAAAGTAGGATGAGATTCAATTGGGAAGCAAGGAAGGAAGTGTCCATAGGTGTGGCCTCTGTTCTTGCGTTTCTTCATGAGGAACTTAAGCCTCATATTCTGCATAGAGATATCAAATCAAGCAACATCCTTCTTGATCGAGATTTCACACCGAAGGTCTCGGATTTTGGTCTCGCAAAGCTACTAAGAGATGACAAGTCTTATATCAGCACTCGAGTTGCTGGGACATTGGGCTATCTTGCTCCAGAGTATGCTAGTTCCGGACAAGTGTCGCGAAAATCAGATGTTTACAGCTTTGGAGTGCTACTCTTAGAAATTATTAGTGGAAGACCGGTGGTTGGTGCTTATGAAGACAGGGAACGTTTCATAGTAGAGAAGGCTTGGGCAGCATATGGAGAGAATGATCTATTAAAAATGGTTGATCCAGTGCTAGATATGAACTATCCTGGGGAGGAGGCGAAACGATTCCTCATGGTGGGTTTGCTTTGCGTTCAAGAAACTGCAAAGATTAGACCGCGGATGCCAGAGGTTGTAGACATGTTGAAGAACAAAAAGGACATGGAATGTGTACAGATTTCGAAACCGGGTTTTGTTGAGGATCTAAGGAACATTAGAATCAGGCAGGAAGTAATGCATTCATCGGAAGAATCAAGTTCTGGTGGAGCAACATTTGCAAGTACTTCATCATTGACTACTTCTACTCTTGCCCGTTAG 1134 0.44 MKIIHSCFSTCFSVKEETKQEEEPNKEDESDGNFRVFTYRELASATRGFHPSHKIGEGGFGSVYKGGLRDGTLVAVKVLSIEMESMRGEREFVAELATLANIKHQNLVILRGCCVEGAKRYLVYDYMENNNLHHTFLGSEESRMRFNWEARKEVSIGVASVLAFLHEELKPHILHRDIKSSNILLDRDFTPKVSDFGLAKLLRDDKSYISTRVAGTLGYLAPEYASSGQVSRKSDVYSFGVLLLEIISGRPVVGAYEDRERFIVEKAWAAYGENDLLKMVDPVLDMNYPGEEAKRFLMVGLLCVQETAKIRPRMPEVVDMLKNKKDMECVQISKPGFVEDLRNIRIRQEVMHSSEESSSGGATFASTSSLTTSTLAR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01927 377 MobiDBLite consensus disorder prediction 352 377 - -
Arst6g01927 377 Gene3D Transferase(Phosphotransferase) domain 1 127 335 - -
Arst6g01927 377 Pfam Protein kinase domain 50 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01927 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Arst6g01927 377 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Arst6g01927 377 ProSiteProfiles Protein kinase domain profile. 49 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01927 377 Gene3D Phosphorylase Kinase; domain 1 17 126 - -
Arst6g01927 377 SUPERFAMILY Protein kinase-like (PK-like) 30 335 IPR011009 -
Arst6g01927 377 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 127 333 - -
Arst6g01927 377 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 33 366 - -
Arst6g01927 377 SMART serkin_6 49 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01927 377 MobiDBLite consensus disorder prediction 353 377 - -
Arst6g01927 377 FunFam Serine/threonine-protein kinase receptor 18 126 - -
Arst6g01927 377 CDD STKc_IRAK 55 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01927 Arst-Chr6 26827802 26830503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01927 36 370 Receptor kinase-like Gene Family AT1G07650 46.221 3.34e-91 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst6g01927 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01927 - - gmx:100813945 505.753