Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01923 ATGGCATTGTGTAACAAACTTGGAAATTTCTTGAGACAAAGTGCTTCAGGAAGCAGATTAGCATCTGCTCCATCAATGCTCAATTATATTCGCTGCATGTCCTCAAACAGGCTTTTCATTGGGGGCCTTTCATATGGAGTTGATGACCAGTCTCTTCGGGATGCATTCTCTGGCTTTGGGGATGTGGTTGATGCAAGGGTGGTCACTGATAGAGACACCGGACGATCAAGAGGTTTCGGATTTGTCAACTTCTCAAGTGATGAGTCTGCAAGCTCAGCACTCACTGCAATGGATGGGCAGGATCTAAATGGTCGAGTGATCAGGGTGAGCTATGCAAATGATAGGCCTTCTGGACCTCGAGGTGGTGGCGGAGGTTTTGGTGGTGGTGGTGGTTACGGGGAAGGTGGTTACCGTAGAGGTGGAGGTGGTGGTTATGGTGATCCAGCCTTCTAG 453 0.4901 MALCNKLGNFLRQSASGSRLASAPSMLNYIRCMSSNRLFIGGLSYGVDDQSLRDAFSGFGDVVDARVVTDRDTGRSRGFGFVNFSSDESASSALTAMDGQDLNGRVIRVSYANDRPSGPRGGGGGFGGGGGYGEGGYRRGGGGGYGDPAF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01923 150 SMART rrm1_1 37 110 IPR000504 GO:0003723
Arst6g01923 150 MobiDBLite consensus disorder prediction 112 150 - -
Arst6g01923 150 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Arst6g01923 150 SUPERFAMILY RNA-binding domain, RBD 31 146 IPR035979 GO:0003676
Arst6g01923 150 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Arst6g01923 150 CDD RRM2_NsCP33_like 37 112 - -
Arst6g01923 150 Gene3D - 31 148 IPR012677 -
Arst6g01923 150 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 33 143 - -
Arst6g01923 150 FunFam Glycine-rich RNA-binding protein 2 25 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01923 Arst-Chr6 26600631 26602622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01923 35 126 Eukaryotic Initiation Factors Gene Family AT1G49760 40.217 1.45e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01923 - - gmx:100499841 185.267