Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01921 ATGGCAACTCAGCAACAAGAACAAGACTTTCCAATGCACAGAGACCAAGTTGATGGTATCACTACCACTGCTACCGTAGCTCACACTGCAATTCATAAGGGTGTAGAATCAAGTGAAATAACTGAACTACCTAGTAGACAACATGGAAGAAGGCAAAATCTTATGTTGGAGATACCTGCAAGAAATCTTGATGAAGCAAGAGAGGAATTCTTGAGAATTAACATGCCTTCTACAAGCCCTGCTTTCTCCAGTATCAATGAGTTACAACCAAAAAATAAATCAAATATTAAAGCCCTTATTCCCAAACTTAGCTTTAAGTTAGGGAACACCGAAAAGGCTTCCATTCTAGCACTTGAAGGTTCTTCCACAGAGGTGCCGAAAAAGCCTATGATTTCGAGGACATTATCTCTTACAAAGTTGATCACACCTAGAGGGAAGAAGATGTCATCTTTACCCGTGACACCAATTGGAGGAAACACAACCAATATGACAACATATGTGAGAAAAGGACAGCAATCATCGATCCATCGTTCGCGTTCAGTTCCTGCACTTAACAAAGATGGGAACACATCAGTAGGTGTGATGCTGCGCATAGTTCCTACTACGCCACGGTTAGCTGGTAGCGCTGCCACAACATCTATGAAATCTTCACCTGACATTACTGTTGAGAATGAGGATGGAGAGGACATTCCTGAAGAAGAAGCTGTGTGTAGAATATGTTTGATTGAACTTGGAGAAGGTTCTGATACCCTTAAAATGGAGTGCAGCTGCAAAGGTGAACTAGCATTGGCGCACCAAGAATGCGTGGTTAAATGGTTCAGCATCAAAGGTAACAGAACATGTGATGTGTGCAAGGAACAAGTTCAGAACCTACCTGTCACTCTTTTACGAATTGCGAGTACTCATTCACCAAACTTCTTGATAAGTAGCCAAGGTCAGCAATACAGGGTTTGGGAAACTGTTCCAATTCTTGTGGTTATCAACATGATGGCTTACTTCTGTTTTGTTGAGCAGCTTCTTGTTTCAAATATGGGGTCTGGTGCCATTGCAATATCTCTCCCATTTTCTTGTATATTAGGCCTTCTTTCAAGCATGACATCAACAACAATGGCGAGGAGAAAACATGTCTGGCTTTATGCGATTGCCCAATTTGTTATGGTGTTTCTTGCTGGTCGTCTTTTCTATTCACTGCTTCATGTGCAAGCAGTGCTATCTATGCTACTTGCTACATTTACTGGGTTTGGAGCTGTAATGTGTGTAGCCTCTGTTCTGTTTGAGTTTCTGAAATGGAGGAGAAGATGGTTTGCTCAGTTGAATCAGCATCAGCTTGGTTCCCAAGAGGTGGCTGTATCAACTCATCAATCATCTGCAACAACCACTTAA 1383 0.4187 MATQQQEQDFPMHRDQVDGITTTATVAHTAIHKGVESSEITELPSRQHGRRQNLMLEIPARNLDEAREEFLRINMPSTSPAFSSINELQPKNKSNIKALIPKLSFKLGNTEKASILALEGSSTEVPKKPMISRTLSLTKLITPRGKKMSSLPVTPIGGNTTNMTTYVRKGQQSSIHRSRSVPALNKDGNTSVGVMLRIVPTTPRLAGSAATTSMKSSPDITVENEDGEDIPEEEAVCRICLIELGEGSDTLKMECSCKGELALAHQECVVKWFSIKGNRTCDVCKEQVQNLPVTLLRIASTHSPNFLISSQGQQYRVWETVPILVVINMMAYFCFVEQLLVSNMGSGAIAISLPFSCILGLLSSMTSTTMARRKHVWLYAIAQFVMVFLAGRLFYSLLHVQAVLSMLLATFTGFGAVMCVASVLFEFLKWRRRWFAQLNQHQLGSQEVAVSTHQSSATTT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01921 460 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 222 292 IPR013083 -
Arst6g01921 460 CDD RING_CH-C4HC3_MARCH 237 285 - -
Arst6g01921 460 SMART ringv_2 236 285 IPR011016 GO:0008270
Arst6g01921 460 Pfam RING-variant domain 237 284 IPR011016 GO:0008270
Arst6g01921 460 ProSiteProfiles Zinc finger RING-CH-type profile. 229 291 IPR011016 GO:0008270
Arst6g01921 460 SUPERFAMILY RING/U-box 233 288 - -
Arst6g01921 460 PANTHER OS02G0165000 PROTEIN 3 449 - -
Arst6g01921 460 MobiDBLite consensus disorder prediction 207 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01921 Arst-Chr6 26571596 26580026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01921 222 301 C3H Transcription Factor Family AT2G37950 34.568 3.70e-12 63.5