Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01914 ATGAACATTTCACATGTTGCTGATTCTATTGGTTTGAAAGAGATGCCAAGATATGAAGTTAAAATTATTGAGGAGGATGACTGGATGAAAGGAGCTCATGTAGCCAAGGATACACAATTGATAGATTCCATTGCTGAAAAACAATCCCAGATATTTTCAGAAAAATGTGCTCATCCTATGGTTCATGGAGGGATGGGGGTTGCCACTAGTGCATACCCAATGACTGAATCAGTTCTCTCGAGTTCAATGCGGCATGGTGGGATGCTTGGGCATTATAGTGGAAGTTCTACTACTTCAGCTGATAAACCTAAAATAGGCCTGATATGCTTGCGGTGTCGACGGCGTGGTCACCGAGCTAAGAATTGCCCTGAAGTTCAAGTTGGTGCCAATTATGACAAGTATTGTTACAATTGTGGAGAAACTGGTCATTCACCTGCAAATTGTCCCCACCATGTTCAAGAAGGAGGGACAAAGTTTGCAGAGTGCTTTGTCTGTAAACAGCAAGGACACTTGAGTAAAAACTGCCCTCAAAATGCTCATGGCATCTATCCTAAGGGTGGTTGTTGTAAAATATGTGGTGGCGTGACACATTTGGCAAGGGATTGCCCCGAAAAAGGCTTACTGAGAAATGAACAGAGGCCTTGTGGAACGGTAACCAAATTTGTGAGTGGGGATGACATTGAGGATGACTTCATGATAGATGACATAAATAACAGAGACAAGGACAAGTCCTCAAAGTCCAAAGACGGTCAAGCAAAACCAAAAAAGGGTCCTAAAGTTGTGAACTTCAGCTAA 795 0.4264 MNISHVADSIGLKEMPRYEVKIIEEDDWMKGAHVAKDTQLIDSIAEKQSQIFSEKCAHPMVHGGMGVATSAYPMTESVLSSSMRHGGMLGHYSGSSTTSADKPKIGLICLRCRRRGHRAKNCPEVQVGANYDKYCYNCGETGHSPANCPHHVQEGGTKFAECFVCKQQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPEKGLLRNEQRPCGTVTKFVSGDDIEDDFMIDDINNRDKDKSSKSKDGQAKPKKGPKVVNFS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01914 264 MobiDBLite consensus disorder prediction 234 255 - -
Arst6g01914 264 SUPERFAMILY Retrovirus zinc finger-like domains 155 205 IPR036875 GO:0003676|GO:0008270
Arst6g01914 264 MobiDBLite consensus disorder prediction 233 264 - -
Arst6g01914 264 Gene3D - 90 154 - -
Arst6g01914 264 SUPERFAMILY Retrovirus zinc finger-like domains 105 151 IPR036875 GO:0003676|GO:0008270
Arst6g01914 264 FunFam Zinc finger CCHC-type-containing 9 159 212 - -
Arst6g01914 264 ProSiteProfiles Zinc finger CCHC-type profile. 162 177 IPR001878 GO:0003676|GO:0008270
Arst6g01914 264 PANTHER OS04G0555800 PROTEIN 106 263 - -
Arst6g01914 264 ProSiteProfiles Zinc finger CCHC-type profile. 135 149 IPR001878 GO:0003676|GO:0008270
Arst6g01914 264 Pfam Zinc knuckle 162 177 IPR001878 GO:0003676|GO:0008270
Arst6g01914 264 Pfam Zinc knuckle 134 150 IPR001878 GO:0003676|GO:0008270
Arst6g01914 264 SMART c2hcfinal6 161 177 IPR001878 GO:0003676|GO:0008270
Arst6g01914 264 SMART c2hcfinal6 188 204 IPR001878 GO:0003676|GO:0008270
Arst6g01914 264 SMART c2hcfinal6 108 124 IPR001878 GO:0003676|GO:0008270
Arst6g01914 264 SMART c2hcfinal6 134 150 IPR001878 GO:0003676|GO:0008270
Arst6g01914 264 Gene3D - 155 206 - -
Arst6g01914 264 Pfam Plant nuclear matrix protein 1 (NMP1) 24 57 IPR010604 GO:0051011
Arst6g01914 264 ProSiteProfiles Zinc finger CCHC-type profile. 109 124 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01914 Arst-Chr6 25783806 25786768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01914 107 205 C2H2 Transcription Factor Family AT5G20220 29.060 3.44e-07 48.9