Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01887 ATGGATATTGATGAAGCTGAGAGAGTAGTCGTGGCAAAACCAGTTGCTTCAAGGCCTAATTGTTCTACTTTCAGATCTTTCTCTGAGCTTCTTGCAGGTGCCATTAATGCCTCATCACCTCAAATTGAATCTTCCCAGGCAACAGTTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCGGCACTGAACCGCACCCCCACTGCGTCTGTTGCTTCTCAGGATGACATTTTTGAAGCTGCACTTTGTGATTCTTCCCACAAGAGTCCTAATTCTGACACCAAGCAGTCCCTCATATACAAACCAATGGCAAAACTTGTGTCAAGGACAACAGTTTCTCTTTTGGCAAATATGGGAAATTGCCGTACAATTCAGCAACAATCCGGGCAATCAATGGAGGGTGGTCTTCATCATATCAGCCATGAAAGTTTCGGAACTAATCTGAGCTCTGATCTTTATCACAGTCACAGCATTACACCACCTTCTGAAACTACTGAACCTTGTAAGATGATGCAACAGAACATAGAGGAGGATCAGAAGGCTTTAACATCCGCAATCAATTGCGATCGACCTTCTTATGATGGGTATAACTGGAGGAAATACGGGCAGAAGCAAGTGAAAGGAAGTGAGTATCCGCGGAGTTATTATAAGTGCACTCATCCTAATTGTCCAGTGAAGAAGAAGGTTGAGAGATCATTTGATGGACAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATCCAAAGCCACAGCCTCCCAAGCGCAGCGGAACAGCAGGGATGCAAGGATCAGGAATGGTGCCTGATGGAGTGCCTCAAGATGTGTGGAGTAACAATCACAGTGAGAGGAATGATAGCAGAATAGAAAACCAGAATGACACAGGGCTGCCTGCGAATTCGGTTTATGGGGTTAAAGTTTCGCAGCCTAATGATTCTATTTTAAATGCATGTGGGATAAGCCCAGAAAATTCGTGTGGTCTAAGTGGGGAATGTGAGCAAGGAAGCAAAGGATTTGAGGCAGAGGAGGAAGAATCTAGAAGTAAAAGAAGGAGGAATGAGAGTCGATCCAATGAAGCAGCCGTGTCGGAGGAAGCATTAATCGAGCCACGCATTGTGCTGCAGAGTTCTACAGATTCAGAGATAATTGGTGATGGCTTCCGCTGGAGGAAGTACGGGCAGAAGGTGGTGAAGGGCAATCCATATCCCAGAAGTTACTACAGATGTACAAATGTGAAGTGTAATGTTCGAAAGCACGTGGAGAGAGCAATAGATGATCCAAGAGCATTTGTCACTACATATGAGGGAAAGCACAATCACGAGATGCCAATCAAGAACATCAACCCAAATGTCCCCTCTGAGAGAGATTCACAAGCTTCTCTTAGTAAAGACAAACCATGA 1401 0.4454 MDIDEAERVVVAKPVASRPNCSTFRSFSELLAGAINASSPQIESSQATVSAIRPKTVRFKPALNRTPTASVASQDDIFEAALCDSSHKSPNSDTKQSLIYKPMAKLVSRTTVSLLANMGNCRTIQQQSGQSMEGGLHHISHESFGTNLSSDLYHSHSITPPSETTEPCKMMQQNIEEDQKALTSAINCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHPKPQPPKRSGTAGMQGSGMVPDGVPQDVWSNNHSERNDSRIENQNDTGLPANSVYGVKVSQPNDSILNACGISPENSCGLSGECEQGSKGFEAEEEESRSKRRRNESRSNEAAVSEEALIEPRIVLQSSTDSEIIGDGFRWRKYGQKVVKGNPYPRSYYRCTNVKCNVRKHVERAIDDPRAFVTTYEGKHNHEMPIKNINPNVPSERDSQASLSKDKP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01887 466 FunFam WRKY transcription factor 57 369 443 - -
Arst6g01887 466 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 146 450 IPR044810 GO:0003700
Arst6g01887 466 ProSiteProfiles WRKY domain profile. 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 MobiDBLite consensus disorder prediction 440 466 - -
Arst6g01887 466 Gene3D WRKY domain 178 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 Gene3D WRKY domain 369 444 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 MobiDBLite consensus disorder prediction 329 363 - -
Arst6g01887 466 Pfam WRKY DNA -binding domain 194 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 Pfam WRKY DNA -binding domain 385 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 SUPERFAMILY WRKY DNA-binding domain 191 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 MobiDBLite consensus disorder prediction 242 304 - -
Arst6g01887 466 MobiDBLite consensus disorder prediction 336 359 - -
Arst6g01887 466 SMART WRKY_cls 383 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 ProSiteProfiles WRKY domain profile. 378 443 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g01887 466 FunFam WRKY transcription factor 178 252 - -
Arst6g01887 466 SUPERFAMILY WRKY DNA-binding domain 378 443 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01887 Arst-Chr6 23726106 23732077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01887 91 444 WRKY Transcription Factor Family AT2G37260 42.706 6.60e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst6g01887 WRKY 5.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01887 - - gmx:100794069 675.626