Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01876 ATGGCGCCTTCTTCTTCTTCAACTTCCACTGATCAAGCCTCTGCCAAGAAGGTCAGAAAGCCTTACACCATTACCAAATCCAGAGAGAGCTGGTCCGACGAAGAACACGACAAGTTCCTCGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAGGATTTTGTAGGCTCAAAAACTGTTATTCAGATTCGTAGCCATGCCCAAAAGTACTTCTTGAAAGTTCAAAAGAACGGGACAACTGCACATGTGCCTCCTCCTCGTCCTAAGCGAAAAGCTGCTCACCCTTACCCACAAAAGGCATCAAAAAATGTTTTGATGCCATTTCCAGCATCTATTGCTTATGATTCTTCAAGAAACACCCTTTTACCTGGCTATGCAGTAACATGGGATGAAAATTCAATGCTCATGAATGCTGAATCCAATAAACTCATGCTCTGCCAGGATGAACTCATCACAAATCTTACTGGAAATGAAGATGATATTGGATCAAGGGGGATTAGAATGCCGGCGGCTACTGAGATGCCAAATCATGGAAAACAAGCTTGTGTAATTCCTGGTTTGCCGGATTTTGCTGAAGTTTACAGCTTTATTGGAAGCGTTTTTGATCCTGACACTAGAGGCCATGTTCATAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAAAAATCTCACAATCAACTTGTCTAGCCCTGACATTGAGCCCTTTAAGAAGTCATTGTCGTTATATGATGTCAATACAAAGACAGTTGGAATTGAATGTCAAGAACAAACAAATGACCTATCATGTCTAACAGCTTAG 825 0.4061 MAPSSSSTSTDQASAKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTTAHVPPPRPKRKAAHPYPQKASKNVLMPFPASIAYDSSRNTLLPGYAVTWDENSMLMNAESNKLMLCQDELITNLTGNEDDIGSRGIRMPAATEMPNHGKQACVIPGLPDFAEVYSFIGSVFDPDTRGHVHKLKEMDPINFETVLLLMKNLTINLSSPDIEPFKKSLSLYDVNTKTVGIECQEQTNDLSCLTA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01876 274 NCBIfam myb-like DNA-binding domain, SHAQKYF class 26 75 IPR006447 GO:0003677
Arst6g01876 274 PANTHER SWI/SNF COMPLEX-RELATED 6 237 - -
Arst6g01876 274 MobiDBLite consensus disorder prediction 1 32 - -
Arst6g01876 274 ProSiteProfiles Myb-like domain profile. 23 73 IPR001005 -
Arst6g01876 274 ProSiteProfiles SANT domain profile. 26 79 IPR017884 -
Arst6g01876 274 Gene3D - 31 78 - -
Arst6g01876 274 MobiDBLite consensus disorder prediction 79 100 - -
Arst6g01876 274 FunFam protein REVEILLE 6 isoform X1 30 78 - -
Arst6g01876 274 MobiDBLite consensus disorder prediction 1 16 - -
Arst6g01876 274 CDD SANT 30 73 IPR001005 -
Arst6g01876 274 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Arst6g01876 274 SMART sant 27 75 IPR001005 -
Arst6g01876 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 77 IPR017930 -
Arst6g01876 274 SUPERFAMILY Homeodomain-like 22 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01876 Arst-Chr6 23100881 23104033 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst6g01876 Myb_DNA-binding 4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01876 - - gmx:100783482 396.741