Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01874 ATGTTGGATCTTAATCTCAACGCCGATTCCGCCTCCGGCATCCAAATGGAAAGTTCTGGAAGCTTCAATTCCTCCCTCGCCAATGCCGACACCGAGGACTCATGCTCCTACGGCGGGGCTGACGCCGTAGCATACAACTTCGCCATACTCAAGAACGCCGTCGGCGGGGACGGAGACGCTGGAGCTGCCGGAGACGACGGATGTGTACGGACAATCCAGCTTTTTCCGATGGTCGGAGCCGGCGATGGTGTTGCAGCTGAGCAGTTATGTGGCTCGTCATCAGTGTTGGAATTTGAGACGAAGGAGGATCGCGGCGGTGGTAGTGCGACGGCGGCGGAGCAGAGAATGGTTCCTCAGAGGGCGCAGCAGGTGAAGAAGAGTCGGCGTGGACCGAGGTCGCGAAGCTCGCAGTATCGCGGCGTCACGTTTTATCGAAGGACCGGACGATGGGAATCGCATATTTGGGACTGTGGGAAACAAGTGTACTTGGGTGGATTTGACACAGCACATGCTGCAGCTAGGGCATATGATCAAGCTGCGATCAAGTTCCGTGGCGTTGATGCAGATATCAATTTCAATGTCAGCGATTATGATGAAGATATAAAATCCAAATACAGGGGAGTTACCCTGCACAAATGTGGTAGATGGGAAGCACGCATGGGGCAGTTTCTCGGAAAAAAATATATCTATCTTGGCCTATTCGATAGCGAACTAGAGGCTGCAAGGGCATATGATAGGGCTGCTATAAAGTGCAATGGAAGGGAAGCAGTTACTAACTTTGAGCCCAGCTCATATGAAGGAAAGGTAAATTCTCATGATGAGAATGAAGATAACAGGCAAAGTCTTGATCTTAATTTGGGCATAGCTCCCCCTTCTTTCTCTGAAGAACAAGTCAATAACATTCACAACAATGGGATTGGTTTCCAATATCAGCCTAGCTGGGATGACATCCCTATTGATAGGAGATTTATGTTTGAGCACTCTGCATCAAGATCACTGAATACTCAGCCACCTCATGGATTCTCCATACCATCTCAGCATCCTTCTGCTTGGGGCGGTACTGATTTCTTTCCCATCTACAAGGAAAGAGCAATAGAGAATATGATGGAAGCCAATCCCTTGCAAAATTGGGCATGGCAAGTCCAAGGTCATTGTGGCGGGGCAACTCCAATTCCACCTGTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACATTAATGCCATCAGCTGCGGATAATCAAATTCATTTTCCAAACAAGACATTCCTCTACCCTAACTTCCCTCCATCGATTGCCAATTCCGGCACCATATCGCCCTTCTACTAA 1326 0.491 MLDLNLNADSASGIQMESSGSFNSSLANADTEDSCSYGGADAVAYNFAILKNAVGGDGDAGAAGDDGCVRTIQLFPMVGAGDGVAAEQLCGSSSVLEFETKEDRGGGSATAAEQRMVPQRAQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDQAAIKFRGVDADINFNVSDYDEDIKSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSSYEGKVNSHDENEDNRQSLDLNLGIAPPSFSEEQVNNIHNNGIGFQYQPSWDDIPIDRRFMFEHSASRSLNTQPPHGFSIPSQHPSAWGGTDFFPIYKERAIENMMEANPLQNWAWQVQGHCGGATPIPPVSAAASSGFPSTLMPSAADNQIHFPNKTFLYPNFPPSIANSGTISPFY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01874 441 FunFam AP2-like ethylene-responsive transcription factor 203 263 - -
Arst6g01874 441 ProSiteProfiles AP2/ERF domain profile. 137 193 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 MobiDBLite consensus disorder prediction 101 137 - -
Arst6g01874 441 SMART rav1_2 204 267 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 SMART rav1_2 137 199 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 CDD AP2 203 263 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 FunFam AP2-like ethylene-responsive transcription factor 136 195 - -
Arst6g01874 441 CDD AP2 137 195 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 Pfam AP2 domain 137 185 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 Pfam AP2 domain 203 253 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 SUPERFAMILY DNA-binding domain 136 195 IPR016177 GO:0003677
Arst6g01874 441 PRINTS Ethylene responsive element binding protein signature 205 216 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 PRINTS Ethylene responsive element binding protein signature 243 263 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 SUPERFAMILY DNA-binding domain 203 262 IPR016177 GO:0003677
Arst6g01874 441 ProSiteProfiles AP2/ERF domain profile. 204 261 IPR001471 GO:0003700|GO:0006355
Arst6g01874 441 Gene3D AP2/ERF domain 136 195 IPR036955 GO:0003700|GO:0006355
Arst6g01874 441 Gene3D AP2/ERF domain 203 262 IPR036955 GO:0003700|GO:0006355
Arst6g01874 441 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 109 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01874 Arst-Chr6 22891492 22894776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01874 71 306 AP2-EREBP Transcription Factor Family AT4G36920 54.930 1.81e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst6g01874 AP2 9.6e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01874 6 22891492 22894776 Arst6g01874 6 22891492 22894776 ECH
Arst6g01874 6 22891492 22894776 Arst2g02784 2 84848169 84849953 PCT