Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01848 ATGGGGAGAAAAGGAAATTGGTTTTCTTCTGTGAAGAAAGCTCTGAGTCCTGACTCAAAGGAGAAGAAAGAACAGAAATCAAAGAAGAAATGGTTTGGGAAGCAGAAGTTGCAGAGTTCAGGCTCATACCAGGAATCTGATAAAGCACCACCTCTTCTGCCACCAGAAGATGTTAAATTGGCTGATCTTGAAATTGAAAGCGGTCATGATCGTGTTGTTGAAGTTGCAACTTCTGCAGATGTTGAGGAACCTGTTCCTGCTGTTGCAGTTCAGGCACCAGTGGTTAGGGTTGAAGCTGCTACTACCAGTCATACAATTACTCGGTTCTCTGGCAAACCAAAGGAAGAAGTGGCAGCAATTAAGATTCAAACGGCTTTCCGGGGATACTTGGCAAGAAGAGCGCTGCGGGCTTTAAGAGGACTGGTCAGATTGAAGTCATTGATGGAAGGGCCCATTGTTAAGCGCCAAGCGATAAGTACCCTTCGCTCTATGCAGACTTTAGCTCGTGTGCAAGGTCAGATTCGTTCTCGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTGCAGCGACAGCTCTTGCAGAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGCGAGGAATGGGATGACAGCTTACAATCAAAAGAACAGATTGAAGCCAAGTTACTGGGCAAGTATGAGGCTGCTATGAGAAGAGAAAGGGCACTGGCTTATGCATTCACTCATCAGCAAAACGGGAAGAGCTCATCTAAATCTATGAATCCCATGTTCATGGATCCAACCAATCCTAGCTGGGGTTGGAGTTGGCTGGAACGATGGATGGCAGCTCGACCTTGGGAGAGCCGTGGCATGATGGATAAAGAGCTGCACGACCATTCATCCATAAAAAGCTCAAGCCGCAGCATTACTGCTGGGGAAATCAGCAAATCATTTGCTCGTTTCCAGCTAAATTCTGAAACGCACTCTCCAACGGCCAGCCAAAATCCCGGCACACCTAGCTTCCAGTCCCATTCGGCTCCTCCCAAGGCACCGGCTTCTCCAGCAGTCGCTAGGAAACTGAAGAAGGGGAGCCCAAAGGGCAGCTTGGTTTTGGAAGATGACTCCAAAAGCATGGTCAGTGTACAGTCAGACCGGTTTCGGAGGCACTCCATCGCCGGATCATCAGTGAGGGATGATGAGAGCCTTGCCAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCAAAGTCCATTAACCATGGAAAATGGGAAAACAGATAAGGGTTCCTTTGGGACTGCAAAGAAGCGTCTTTCTTTTCCGGCTTCACCTGCCAGACCACCCCGGCGGCATTCAGGTCCACCGAAGATAGAAAGCAGTTTAAATGCAGAATTCGCCGTGAGCAACGGTGCGGCCAGTTGA 1437 0.4885 MGRKGNWFSSVKKALSPDSKEKKEQKSKKKWFGKQKLQSSGSYQESDKAPPLLPPEDVKLADLEIESGHDRVVEVATSADVEEPVPAVAVQAPVVRVEAATTSHTITRFSGKPKEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQAISTLRSMQTLARVQGQIRSRRIRMLEENQALQRQLLQKHAKELESMRIGEEWDDSLQSKEQIEAKLLGKYEAAMRRERALAYAFTHQQNGKSSSKSMNPMFMDPTNPSWGWSWLERWMAARPWESRGMMDKELHDHSSIKSSSRSITAGEISKSFARFQLNSETHSPTASQNPGTPSFQSHSAPPKAPASPAVARKLKKGSPKGSLVLEDDSKSMVSVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKAKSRTQSQSPLTMENGKTDKGSFGTAKKRLSFPASPARPPRRHSGPPKIESSLNAEFAVSNGAAS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01848 478 Gene3D iswi atpase 112 149 - -
Arst6g01848 478 MobiDBLite consensus disorder prediction 319 478 - -
Arst6g01848 478 MobiDBLite consensus disorder prediction 391 432 - -
Arst6g01848 478 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Arst6g01848 478 PANTHER IQ-DOMAIN 5-RELATED 1 459 - -
Arst6g01848 478 MobiDBLite consensus disorder prediction 319 341 - -
Arst6g01848 478 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Arst6g01848 478 SMART iq_5 114 136 IPR000048 GO:0005515
Arst6g01848 478 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01848 Arst-Chr6 21668927 21672567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01848 1 478 IQD Protein Family AT5G03040 53.955 1.46e-153 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01848 - - gmx:100800080 636.721