Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01847 ATGGACGTTCCCGAGGCTGTTGACATTAATGCAATGTGTGAGGAGGGGGCAGGCGTGATGGGCACAGTCGATTTTGGAGATGTAGCCGATATAACGGAAAATGATATTTTGAGGAAGGTGTTTCGTAGCGAAGACGATGCATACGAGTTTTATAAGAGATTAGGAAAATTCTACGGGTTTGGTATAAGAAGGGGAGACATGTTCAAGGATGAGAAGGGTAATTTGGTTCGGAGAAGATTTTTTTGCAATAGAGAGGGACAGAGAGATAAGAAACATTATAACAGGATCGACAGGAAGAGGCCTCACAAGCCGGAGACAAGGACGAATTGTGAAGCAAGAATGTGTATATATTTAGATAAGGACAGCTCGTTGTGGAGGGTCAAGAAAATCATTTTGAACCACAATCACAACATGACTCATCCTGGAATGGTCCATCTAATTACAAGTTTTCGTTCGTTGACGGATGCTGCGAAAGCCCAATTAGATGGGTTTCAAGGTTGTGGCATCTCCACGGCAAAGACAATGCGGTACATGGCTGGGGTATCTGGAGGGTATTCATTGGTAGGTTTTTTGAAGAAAGATGCTTATAACTACGTGGATAAGAGGCGTCGTGCAAAGATAGTTGACGGAGACGCAAACGCAGCTATAGTGTACTTGGAGGGTAAAGTCGATGCAGACCCAACTTCGATGGCAAGGTATAATGTGACAGAAGACGAGATGCTAGCGAATTTACTGTGGGCAGATGGTGGCAACAGGATAGATTACCAATACTTTAGAGACGTACTTGTATTCGACTCAACCTACAAGAAGGACAAATACAAGAGGCCACTAGTGATTTTCTCAGGATATGAGAGCATTGCATCATACACGTGGCTGTTGGAGAATTTCTTGGAGGTCATGTGCAGCAAGCAGCCTTCTGTTGTTGTCACAGATGGTGATGACTCAATTCGAGAAGCCGTTCGAACAATTTTTCCAAATGCCACGCATAGGTTATGTGCTTGGCACTTAGAGAAGAATGTCACGTCAAACGTGAAGGATGACAATTTACGTCGGCTTTTTAATCGGTGGATTTATTCTGAAATGAGGGTTGATGACTTTGAGGCAGAGTGGGCTCAGGCCGCAGCCGATTATGGCTTGCAGGATTCACTATGGTGGAACCAAGTCTATGGGAAAAAGGAGATGTGGGCAAACGCTTTCTTGTGCGAGAAATTCTGTGCCGGGTATCGGACAACATCACGGTGCGAAGGGATAAATTCGGTGTGCAAGAATTTTCTTGAATCAAAACACAGTATGTTGGAGCTTGTTCAGAATCTAGAACTTCTTGTGCGAGAGTATAGGAACAATGAGTTGTTGGCACAGTTCAGGTCTATTTATAGTGAACCAGTGCTGACAACCTCGCTGGAATCCCTTGAGCGTCATGCAGCTTCTGTTTACACGAGAGCGGTATTTGTAGATGCTAAACGGGAGATTCAGAGTGTATCTTCAGTTAATTTTGTTGGGGTGAGGCGGTCATTGACCACAAAGGTGTACACAGTTGAGGAGTACGGTCATCCAGGCCGTCATATTATAGTATTATGTGATAAGAACATGGGTAAATTAGAATGTGGTTGTAATTTTTGGAGAATTCAGGGGTTTCCATGCAAACATATGTTTTTTGTCATGAAGCATGAACACTTGTTGACAATACCTAGTAGTCTAGTGTTGAAGCGTTGGACCAAAGAAGCAAAATCATTAGGCGCATACGCTGAGAAAACAGATGACGGGGGTGATAGAGGGTTCTTGCTTCGCCATGGAGCACTTCATTCGGCGTCCAGATGGTTGTTCTTTTTAGGGGCCCAGAAGGTTGGGTTATTCGGTGTTGCTTTGGAGGGGATTCGCCGACTATGTGCAACATTGGAATCAGAGTTGGCCAATGGTGTTCATCCTACCAAGTCTAAGCAACGCGGTGAAATTCGAGATCCAGTTGTTGTGCGAACAAAGGGAGCACCAAGGGGTCATAAGAGAAAGGCGTCCAAGAGAAAGTGTGCGAACTGCAACAAGCCGGGACATACAAAGAGGACTTGCACAGATGGAAGGCCTTGTCGGGGAAAAAAACCCCGAGTGGATACATTCAATTCTGCTGAGGACGGGGGACAAAGTGAGGAGGTGGCTGAACTGGAAGCGACCGGATCCAATGATCAAACTATTGGGGTAGAACACGTGATTGGAGGTGGGTCTGTTCGAATGCCGCAGGTAGAACTAATCAATACGGTTCCATTTTGCAGATACCGTGGGCAGTAG 2280 0.4522 MDVPEAVDINAMCEEGAGVMGTVDFGDVADITENDILRKVFRSEDDAYEFYKRLGKFYGFGIRRGDMFKDEKGNLVRRRFFCNREGQRDKKHYNRIDRKRPHKPETRTNCEARMCIYLDKDSSLWRVKKIILNHNHNMTHPGMVHLITSFRSLTDAAKAQLDGFQGCGISTAKTMRYMAGVSGGYSLVGFLKKDAYNYVDKRRRAKIVDGDANAAIVYLEGKVDADPTSMARYNVTEDEMLANLLWADGGNRIDYQYFRDVLVFDSTYKKDKYKRPLVIFSGYESIASYTWLLENFLEVMCSKQPSVVVTDGDDSIREAVRTIFPNATHRLCAWHLEKNVTSNVKDDNLRRLFNRWIYSEMRVDDFEAEWAQAAADYGLQDSLWWNQVYGKKEMWANAFLCEKFCAGYRTTSRCEGINSVCKNFLESKHSMLELVQNLELLVREYRNNELLAQFRSIYSEPVLTTSLESLERHAASVYTRAVFVDAKREIQSVSSVNFVGVRRSLTTKVYTVEEYGHPGRHIIVLCDKNMGKLECGCNFWRIQGFPCKHMFFVMKHEHLLTIPSSLVLKRWTKEAKSLGAYAEKTDDGGDRGFLLRHGALHSASRWLFFLGAQKVGLFGVALEGIRRLCATLESELANGVHPTKSKQRGEIRDPVVVRTKGAPRGHKRKASKRKCANCNKPGHTKRTCTDGRPCRGKKPRVDTFNSAEDGGQSEEVAELEATGSNDQTIGVEHVIGGGSVRMPQVELINTVPFCRYRGQ 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01847 759 MobiDBLite consensus disorder prediction 685 704 - -
Arst6g01847 759 MobiDBLite consensus disorder prediction 660 712 - -
Arst6g01847 759 Pfam FAR1 DNA-binding domain 49 138 IPR004330 -
Arst6g01847 759 ProSiteProfiles Zinc finger CCHC-type profile. 673 690 IPR001878 GO:0003676|GO:0008270
Arst6g01847 759 SMART 26again6 533 560 IPR006564 GO:0008270
Arst6g01847 759 Pfam MULE transposase domain 284 339 IPR018289 -
Arst6g01847 759 ProSiteProfiles Zinc finger SWIM-type profile. 520 558 IPR007527 GO:0008270
Arst6g01847 759 PANTHER OS01G0519700 PROTEIN 35 578 - -
Arst6g01847 759 Coils Coil 428 448 - -
Arst6g01847 759 MobiDBLite consensus disorder prediction 661 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01847 Arst-Chr6 21657986 21660468 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst6g01847 FAR1 2.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01847 - - adu:107493380 1562.36