Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01812 ATGTCTGACCCAACAACACAACCAACTATGCTCCCTTTCTTCAACCAATCCATGGAACTCGTCCAACTCCCCAACCCAACCGCAACCCGAATCCGAAGCCGAACCGGTTTCTCCCCCACCCTCGGCGAGCTCCTCAAACACGTAGAAGATGCTCAAAACGACAACCCTAACGCACCAACACAACATGTTCTCGATCTCAATTCTACTCCTAACTCCTCTCACCCTTTTGTTCTCTCCTTCGCCAACTTAACCTACAGTGTTAAGGTCCGTCGCAAGATGATCCTGTCTCCATGCTTCACCTCAAACCATGACTTGCTGCCGGAGAACGACGCAACGGACGCAAAAACCGATAACGCCGCCACCAAGATTCTCCTAAATGATATCTCCGGTGAGGCGAGGGACGGCGAGATCATGGCGGTACTCGGAGCCAGTGGCTCCGGGAAGTCTACCTTGATCGACGCCCTTGCAGACCGGATCTCCAAGGAGAGCCTCAAGGGAAGTATAACGCTAAACGGAGACGTTTTGGAGTCCAGGATGTTGAAGGTTATCTCCGCTTACGTCATGCAGGACGACCTCCTCTTCCCCATGCTCACCGTGGAGGAAACCCTAATGTTCTCCGCCGAGTTCCGCCTCCCTCGCTCCCTATCCAGGTCCAAGAAGAAGGCTCGCGTTCACGCCCTCATCGACCAGCTCGGCCTCCGCAACGCCGCCACCACCGTCATCGGCGATGAAGGCCACCGCGGCGTCTCCGGAGGTGAGCGCCGACGCGTCTCCATCGGGATAGACATTATCCACGATCCGATTGTCCTCTTCCTCGACGAGCCAACCTCCGGCCTTGACTCCACCAGCGCCTTCATGGTAGTGAAGGTGCTTCAGCGAATCGCACAGAGCGGGAGCATCGTAATCATGTCAATCCACCAACCAAGCTACCGCATCCTCGGCCTCCTCGACCGCCTGATCTTCCTGTCCCACGGCCAAACCGTATTCAGCGGCTCTCCAGCGAGCCTCCCGCCGTTCTTCTCAGAGTTCGGCCACCCCATACCGGAGAACGAGAACCGCACGGAGTTCGCTCTTGACTTAATCCGCGAGCTGGAAGAAGCTCCCGGCGGCACAAAAGGCCTCGTGGACTTCAATAAACAGTGGCAACTCAAGAACAAGAGAATTTCCGAGAAAACCATAAGCGGAATACCGAAAGTGTCCCTGAAGGACGCAATCAGCGCAAGCATTTCCAGGGGTAAACTCGTCTCAGGGGCGCCAGCTGGCACCAGTACCAGTAACGACTCCAACCAACTCGCAGCAGCATCATCAGTCCACAAGTTCGCGAATCCACTCTGGATCGAGATGGCGGTTATAGCAAAACGGTCTCTAACAAACTCACGGAGGATGCCCGAATTATTCGGGATCCGCTTGGGTGCAGTACTAGTGACTGGTGCCATCCTCGCCACCATGTTTTACCACCTCGATAACTCTCCCAAGGGCGTTCAGGAGCGGTTAGGGTTCTTCGCATTCGCTATGTCCACCACCTTCTACACCTGCGCTGAAGCCATCCCCGTCTTCCTCCAAGAACGCTACATCTTTATGAGAGAAACTGCCTACAACGCCTACCGCCGCTCCTCCTACGTCCTCGCTCACTCCATCATCTCCGTCCCTTCTTTAGTCTTCCTCTCCTTCGCCTTTGCCGCCACCACCTTCTGGGCGGTGGGACTCGCCGGCGGCACCAGTGGCTTCCTCTTCTACTTCCTCACCATTGTGGCTAGCTTCTGGGCGGGGAGCTCCTTCGTGACGTTCCTCTCCGGCGTGGTTTCTCACGTGATGCTTGGCTTCACGGTGGTGGTTGCAATTCTAGCGTACTTTTTACTCTTCAGTGGATTCTTCATCAGCAGGGACAGAATCCCACCGTACTGGATATGGTTTCACTACATATCTCTGGTGAAGTACCCGTACGAGGGAGTGTTGCAGAACGAGTTCGATCTGAATCCGCCAAGATGCTTTGTTAGAGGGACGCAGATGTTCGACAGCACGCCGCTGATGGAGGTGCCGGAGGCGTTGAAAGTGGAGCTGCTGAAGAGTATGAGCAAGACGCTGGGGATTAACATCACGAGTTCCACGTGCGTGATTACCGGAGCAGATGTGCTGAAGCAGCAGGGTGTGACGCAGCTGAGCAAGTGGAACTGCCTTTGGATAACGCTCGCTTGGGGTTTCTTCTTCCGTTTCCTTTTCTATTTGACTCTTCTTTTTGGAAGCAAGAATAGGAGAAGGTAA 2262 0.5486 MSDPTTQPTMLPFFNQSMELVQLPNPTATRIRSRTGFSPTLGELLKHVEDAQNDNPNAPTQHVLDLNSTPNSSHPFVLSFANLTYSVKVRRKMILSPCFTSNHDLLPENDATDAKTDNAATKILLNDISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLKGSITLNGDVLESRMLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSRSKKKARVHALIDQLGLRNAATTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRLIFLSHGQTVFSGSPASLPPFFSEFGHPIPENENRTEFALDLIRELEEAPGGTKGLVDFNKQWQLKNKRISEKTISGIPKVSLKDAISASISRGKLVSGAPAGTSTSNDSNQLAAASSVHKFANPLWIEMAVIAKRSLTNSRRMPELFGIRLGAVLVTGAILATMFYHLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISVPSLVFLSFAFAATTFWAVGLAGGTSGFLFYFLTIVASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYISLVKYPYEGVLQNEFDLNPPRCFVRGTQMFDSTPLMEVPEALKVELLKSMSKTLGINITSSTCVITGADVLKQQGVTQLSKWNCLWITLAWGFFFRFLFYLTLLFGSKNRRR 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01812 753 Pfam ABC-2 type transporter 306 385 IPR043926 GO:0140359
Arst6g01812 753 Gene3D - 114 338 IPR027417 -
Arst6g01812 753 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 63 741 - -
Arst6g01812 753 FunFam ABC transporter G family member 6 114 340 - -
Arst6g01812 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 340 IPR027417 -
Arst6g01812 753 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 349 IPR003439 GO:0005524
Arst6g01812 753 Pfam ABC-2 type transporter 450 656 IPR013525 GO:0016020|GO:0140359
Arst6g01812 753 SMART AAA_5 134 349 IPR003593 GO:0016887
Arst6g01812 753 Pfam ABC transporter 125 277 IPR003439 GO:0005524
Arst6g01812 753 ProSitePatterns ABC transporters family signature. 249 263 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01812 Arst-Chr6 20450949 20453823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01812 124 309 Calmodulin-binding Proteins AT2G36910 30.159 5.42e-12 67.8