Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01777 ATGAGTCAGATGAAGAGAGAAATAGATCAAATAGACTTGGCGAATTGCCTTATGCTTCTCTCTAATAATCCAATAATTAGAAAGAAAAGAAGCCTCAATAACAATGGTGAAGTGGAATTCGAGTGCAAGACATGTAACCGCAAGTTCCCATCGTTTCAAGCACTTGGAGGCCACAGAACAAGCCACAACAAGAAGCCAAAGCTGGAATCAGAACCCAACAACAACAACAACGTTGATACTAAGCCGAAGATGCACGAGTGCTCCATTTGTGGCCAAGAATTCTCTCTTGGTCAGGCACTCGGAGGCCACATGAGAAGACACAGATCACCAAATGATCAACATCAACAACTTGTGTCTTCTATCAATGAGATTCAACATGTTGTTGCTAAAGTTCCGGTTTTCAAGAGATCTAATAGTCTAAGGGTTAGGTGCTTGGACTTGAACCTAACACCATTGGAGAATGATTTGAAGCTGCTCTTTGGAAGTATTACTCCTAATAATAAGCTTCATGCCTTAGTTTGA 522 0.41 MSQMKREIDQIDLANCLMLLSNNPIIRKKRSLNNNGEVEFECKTCNRKFPSFQALGGHRTSHNKKPKLESEPNNNNNVDTKPKMHECSICGQEFSLGQALGGHMRRHRSPNDQHQQLVSSINEIQHVVAKVPVFKRSNSLRVRCLDLNLTPLENDLKLLFGSITPNNKLHALV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01777 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Arst6g01777 173 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Arst6g01777 173 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Arst6g01777 173 SUPERFAMILY beta-beta-alpha zinc fingers 40 107 IPR036236 -
Arst6g01777 173 MobiDBLite consensus disorder prediction 53 78 - -
Arst6g01777 173 Pfam C2H2-type zinc finger 40 64 - -
Arst6g01777 173 Pfam C2H2-type zinc finger 85 110 - -
Arst6g01777 173 Gene3D Classic Zinc Finger 37 107 - -
Arst6g01777 173 SMART c2h2final6 40 62 IPR013087 -
Arst6g01777 173 SMART c2h2final6 85 107 IPR013087 -
Arst6g01777 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Arst6g01777 173 PANTHER ZINC FINGER PROTEIN ZAT5 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01777 Arst-Chr6 19107038 19107718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01777 2 161 C2H2 Transcription Factor Family AT2G37430 47.024 5.47e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst6g01777 zf-C2H2_6 4.5e-10 CL0361