Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01757 ATGAGCTGCTTCTCTTGCCTTGTTGATGATGATCACCACGGGAAGCATGGGCCCGGGGAGATGAACAGAATGGAATTATTAATTGAGAACTACTTTAAGAAGAATAATACAGGGAGAGGGCGGAAGAAGAAGAAGCAGGATCGGGGTGAAAGCAAGACAGACGCTGCCATCAGCTTTGGTTTTCGGGAGCTTGAATGGGCAACCGACACTTTCAAGGAAGCCAACTTGATTGGGGAAGGCGGTTTTGGAAGGGTTTACAAGGGTCGTCTCTTGACAGGCCAGGTGGTTGCTGTAAAACAATTAAATCATGACGGGCATCAAGGTTTTCAAGAATTTGTGACAGAGGTGCTTATGCTTAGCCTCCTCCACCATTCTAATCTCGTTAACTTGATTGGCTATTGCACCGATGGTGAGCAGAGGCTGTTGGTGTATGAATATATGCCCATGGGTAGCCTTGAAGATCATCTTTTTGCAGCAGATCCTACATTGAATAATAATAAGGAAGGAGGGCTAAGTTGGATAACTCGAATGAAAATCGCGGCCGGGGCTGCTCGTGGGCTGGAGTATCTCCATTGCAAAGCAAATCCACCTGTTATCTATCGCGACTTGAAATCGGCGAATATCTTATTAGACAATGATTTCAACCCAAAACTCTCAGATTTTGGGCTCGCCAAGCTAGGGCCTGTTGGAGACAACACCCATGTTTCCACCAGAGTCATGGGAACGTACGGCTACTGCGCCCCCGAATATGCCATGAGTGGAAAATTAACTCTTAAATCCGATATTTACAGCTTTGGTGTTGTCTTGCTCGAGTTGATCACTGGTCGTAAGGCCATGGATTTCACTAGAAAACAAGGCAGCCAAAACTTAGTTTCATGGGCTCGTGCTTTCTTAAGTGACAGGAAAAAGTTTAGGCAAATGGTTGACCCTCGATTGCGGGGAAGCTATCCTGTGCGTTGCATGCATCATGCGATTTGTATAACCGCAATGTGTCTGCAGGACCAACCAATTTTTCGTCCACATGTTCGTGATATTGTTGCTGCACTAGATTACATAGTTTCTCAGAGTATTCTTGAACTCGATAAGCATGGAAGACTAGCTTCTCCCTCCGTCTCCGCCATCGTTGATGTCGTTGCTGCACCTTCTGTCGCCGGAGCTGTGTTTCTTTCCCCTTCTCCAATCTTCAAGGAACAAGTCGGAGTTATCGCTCCCGACTTAGACCTTTCACCCCTCTATCTTGACAAGGTGGTCGTTGATGGGGCAATTGTCTCTCCTCCTCGTCCTAAAACTGATTCTGAGCTGAAGACTAGTGGGCAACAAATTATTGAATCTCCTCCTCGTGAGGTGGATCAACAGGAAGGATTTCTGCCGAGTTCTTCTGAGTCTCCGACTTTTGCCGCCGAAGAAATTGCTCCGACCCCTCCGACTCCTGCAGCAGACCCGAGTTCCATTCCTCTTGATGACTCCACTCTTCCTTCCCAGTAA 1485 0.4714 MSCFSCLVDDDHHGKHGPGEMNRMELLIENYFKKNNTGRGRKKKKQDRGESKTDAAISFGFRELEWATDTFKEANLIGEGGFGRVYKGRLLTGQVVAVKQLNHDGHQGFQEFVTEVLMLSLLHHSNLVNLIGYCTDGEQRLLVYEYMPMGSLEDHLFAADPTLNNNKEGGLSWITRMKIAAGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDFTRKQGSQNLVSWARAFLSDRKKFRQMVDPRLRGSYPVRCMHHAICITAMCLQDQPIFRPHVRDIVAALDYIVSQSILELDKHGRLASPSVSAIVDVVAAPSVAGAVFLSPSPIFKEQVGVIAPDLDLSPLYLDKVVVDGAIVSPPRPKTDSELKTSGQQIIESPPREVDQQEGFLPSSSESPTFAAEEIAPTPPTPAADPSSIPLDDSTLPSQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01757 494 FunFam Serine/threonine-protein kinase PBS1 147 365 - -
Arst6g01757 494 PANTHER OS07G0668900 PROTEIN 33 356 - -
Arst6g01757 494 FunFam probable serine/threonine-protein kinase RLCKVII 42 146 - -
Arst6g01757 494 SUPERFAMILY Protein kinase-like (PK-like) 54 347 IPR011009 -
Arst6g01757 494 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Arst6g01757 494 SMART serkin_6 71 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01757 494 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
Arst6g01757 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Arst6g01757 494 Gene3D Transferase(Phosphotransferase) domain 1 147 365 - -
Arst6g01757 494 MobiDBLite consensus disorder prediction 424 494 - -
Arst6g01757 494 Pfam Protein kinase domain 72 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01757 494 ProSiteProfiles Protein kinase domain profile. 71 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01757 494 CDD STKc_IRAK 77 350 - -
Arst6g01757 494 MobiDBLite consensus disorder prediction 430 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01757 Arst-Chr6 18276629 18287467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01757 1 352 Glycoside Hydrolase AT3G07070 54.324 3.32e-135 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Arst6g01757 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01757 - - adu:107493287 952.199