Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01749 ATGGCAAGTCAGGGCTCTAATGAAGGCTCTAGTTCCGGCATTACATCGGCTGAGTGTTCGGATTCAACTGTTCAACTCAACATCAAGACTCTAGATTCACGTGTCTATAATTTTCAACTGGACAAAAATATGCCTGTTTCGTTGTTAAAGGAGAAAATTGCTAATGAAATTGGTCTTCCAGTTGGTCAGCAACGGCTGATTTTTAGAGGAAAAGTCTTAAAGGACGAGCATGTGCTATCTGAGTATCATATCGAGAATGGGCATACCTTGCATCTAGTTGAAAGGCAACCAAATCAGTCACAGGCTTCTGGTAATAGTACTGCTGAGCCAGCTGGTGCTAATGGAAATGATGCAGCCTCCGTGCCTCCTCGTAACCGTGTTGGACAAATTTCACACAGTGTTGTTCTTGGAACTTTTAATGTGGGGGACCAAGGAGAAGGCATTGTTCCTGACCTTACACGGGTTATTGGGGCAGTTTTGAATTCTATTGGAATTGGTGGTCAGAACACAAGTAGTCCTCCCAATGCTACCCAACCTGCTACAGCTCCGCTAGGGAATGAAGCTGCGGGCGTGAATTCTGGGAATCAAAATGCATCTGGAAATCAAGCACAGTCTGGCCAGACATTTCCTGGTCAGGCATTCCAATCTCTGCCTCATGTTGTTCAAATTCCTGTGGCTTCTGGGGCCATACCAATCCCTTCTCTCAATGCTCCAATTCCTGATTCATTGAACACACTCTCTGAATTTATAAATCGCATGGAACAGACACTATTGCTAAATGTTTATCAGTCAAATTTATCTTCAACTAATGCTGGAGATCAACGGGTTGAATTGCCTACCAATGCACAAGGGTTGCCGACAGTTGAAGCATTAAGCACCATCTTGCATCGTACAGAACAGTTGCTTAGTCATCAAGCTGTTGCTGCAATATCTCATATTGCTGGACGGTTGGAGCGAGAGGGAACTTCATCTGATTTAAGTATAAGGGATCAAATACAGTCAGAGGCAGCACACTTAGGACTTGCTATGCAGCATTTGGGCACACTTTTACTTGAGCTTGGCCGAACGATTTTAACCCTGCGTATGGGACAGTCTCCTGCAGAATCTGCTGTAAATGCTGGACCTGCAGTTTATATTTCTCCATCAGGGCCAAATCCTGTAATGGTTCAGCCCTTTCCTCTTCAGACAAACTCACTATTTGGTGGTCCTATTCCTTCTTCAACTCCTCCAGCATTTGGTGCCATTGGTATTGGAAGTGCTCCGCGGAATGTGAACATTCATATACATGCTGGTACTGCTCTTGCTCCCATTGTTTCAGCAATTAGTTCTAGGACAAATAATGGAGAAGGGACAAGAAATGAAAACCGTAATGAGCCTGGCCCTGGGGATTCAGGTTCTGCACGTGCGTTGCCCGTTAGAAATTTCATGTCGGCAGCCTTCCCATCTCACCCTCCTGGTGTTGGAGTTGCCAGTGGCACACAGACTGGGTCAGGTGTTTCTACTTCACAGCCACCACCTAATTCAACTCCATGGTCATCTGCTGCAAATGAATCGAATTTCTTTAGGAACTTAGTTCGTAATATACAAGGAGATAACACAGCTCCATCAGGTCAGATGGCATCAACTGGCCGAGACTTGTCTTCTGGTTCTGAATCAAGGTCTTCCCAGAGAGATGAGCAGGCAGATACCACCGGGATGAATGGCTTCAGAACTGCAACTGCATCCTCAGTTGGCTGTGGCTCTCTCCAAACTGAGTTAGTGCAAACCTGTGATAATGATGAGAGAGGTGTTTCAGTTGACAATTACCCTTCAAGTTCTTCCGGTCAAGGTTTACAAAGCTCTTCTGGTGGAGAAACAACAGTGAAATCAGAACAAGTAAAGGATGCTCCATCTGCAAGTGCGAAACAGGGTGTAGCTGAACCTGCCAGAGCTGCTCCTCTTGGATTGGGCATGGGTGGCTTAGAGCGTAAGAGGCGGACAGGACTTCAACCTCCTGTAAGTAAAGGCGCTGACATATCATCCGGTTCTTCTGTCAACCAAAGTCAGCAAACTGGAACAGAGGGTCAACACACATTACAAGCACTTCCAAGTCATGGCTCTTCTGTGAATGCAAGAAATCCTAATAGACCATCCCAGCAGCCGCTGCCCTCTAGTAATAGGCAGATTGATATGGCTGGTCTGATGTCTCAGGTTTTGCATAGCCCTGCTTTGAATGGTTTGCTTGAAGGGTTTTCACAGCAAACTGGGGTTGACTCACCTAATGGCTTGAGGAATATGTTGCAGCAGTTCACGCAGAGCCCACAGATGATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATATGGGAAATATGTTTGCCGGGATGGAAAGGGGGCAAGGGGGTGGCATTGATTTTTCGACGATTCTTCAACAGATGATGCCTATTGGATCCCGAGCGGCTGGTGGGGATACTCCTCCTCCACTATTCTCTGCTGCAGAACCTGAGACCTTGGCACCTTGCAGAGATGAAAACTCCAATAATACAACTTTACAGCTCAACCTTCAAGAAGTGGTGGATAGGATTGATCACTTGAGCCCACCAGCAGATGTTTTTCGTGCTGTGGCTGAAAATGCCGTCCTGGTATCTGGGGGTGTAAATGTTACCGATGATATTCTGGATGAGTTATGCAGTAATGAGAGTCTTGCCAGCGAATATTTGGAGACGTTGCGATATGATGTGAGACAGCGGCTAGATGGACATTCTGAGCAGGACAAGTCGTAA 2772 0.4618 MASQGSNEGSSSGITSAECSDSTVQLNIKTLDSRVYNFQLDKNMPVSLLKEKIANEIGLPVGQQRLIFRGKVLKDEHVLSEYHIENGHTLHLVERQPNQSQASGNSTAEPAGANGNDAASVPPRNRVGQISHSVVLGTFNVGDQGEGIVPDLTRVIGAVLNSIGIGGQNTSSPPNATQPATAPLGNEAAGVNSGNQNASGNQAQSGQTFPGQAFQSLPHVVQIPVASGAIPIPSLNAPIPDSLNTLSEFINRMEQTLLLNVYQSNLSSTNAGDQRVELPTNAQGLPTVEALSTILHRTEQLLSHQAVAAISHIAGRLEREGTSSDLSIRDQIQSEAAHLGLAMQHLGTLLLELGRTILTLRMGQSPAESAVNAGPAVYISPSGPNPVMVQPFPLQTNSLFGGPIPSSTPPAFGAIGIGSAPRNVNIHIHAGTALAPIVSAISSRTNNGEGTRNENRNEPGPGDSGSARALPVRNFMSAAFPSHPPGVGVASGTQTGSGVSTSQPPPNSTPWSSAANESNFFRNLVRNIQGDNTAPSGQMASTGRDLSSGSESRSSQRDEQADTTGMNGFRTATASSVGCGSLQTELVQTCDNDERGVSVDNYPSSSSGQGLQSSSGGETTVKSEQVKDAPSASAKQGVAEPARAAPLGLGMGGLERKRRTGLQPPVSKGADISSGSSVNQSQQTGTEGQHTLQALPSHGSSVNARNPNRPSQQPLPSSNRQIDMAGLMSQVLHSPALNGLLEGFSQQTGVDSPNGLRNMLQQFTQSPQMMNTVNQIVQQVGSQDMGNMFAGMERGQGGGIDFSTILQQMMPIGSRAAGGDTPPPLFSAAEPETLAPCRDENSNNTTLQLNLQEVVDRIDHLSPPADVFRAVAENAVLVSGGVNVTDDILDELCSNESLASEYLETLRYDVRQRLDGHSEQDKS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01749 923 MobiDBLite consensus disorder prediction 444 515 - -
Arst6g01749 923 MobiDBLite consensus disorder prediction 667 719 - -
Arst6g01749 923 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Arst6g01749 923 MobiDBLite consensus disorder prediction 488 515 - -
Arst6g01749 923 MobiDBLite consensus disorder prediction 444 460 - -
Arst6g01749 923 MobiDBLite consensus disorder prediction 166 210 - -
Arst6g01749 923 PRINTS Ubiquitin signature 55 75 IPR019956 -
Arst6g01749 923 PRINTS Ubiquitin signature 76 97 IPR019956 -
Arst6g01749 923 SMART ubq_7 24 95 IPR000626 GO:0005515
Arst6g01749 923 Gene3D - 14 108 - -
Arst6g01749 923 MobiDBLite consensus disorder prediction 96 125 - -
Arst6g01749 923 CDD Ubl_ubiquitin_like 26 93 - -
Arst6g01749 923 MobiDBLite consensus disorder prediction 529 569 - -
Arst6g01749 923 MobiDBLite consensus disorder prediction 96 113 - -
Arst6g01749 923 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 922 - -
Arst6g01749 923 MobiDBLite consensus disorder prediction 594 630 - -
Arst6g01749 923 SUPERFAMILY Ubiquitin-like 13 98 IPR029071 -
Arst6g01749 923 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Arst6g01749 923 MobiDBLite consensus disorder prediction 594 719 - -
Arst6g01749 923 MobiDBLite consensus disorder prediction 529 550 - -
Arst6g01749 923 FunFam Large proline-rich protein BAG6 16 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01749 Arst-Chr6 18174767 18181756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01749 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 1.70e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01749 - - gmx:100783611 1243.41