Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01748 ATGGCAAGTCAGGGCTCTAATGAAGGCTCTAGTTCCGGCATTACATCGGCTGAGTGTTCGGATTCAACTGTTCAACTCAACATCAAGACTCTAGATTCACGTGTCTATAATTTTCAACTGGACAAAAATATGCCTGTTTCGTTGTTAAAGGAGAAAATTGCTAATGAAATTGGTCTTCCAGTTGGTCAGCAACGGCTGATTTTTAGAGGAAAAGTCTTAAAGGACGAGCATGTGCTATCTGAGTATCATATCGAGAATGGGCATACCTTGCATCTAGTTGAAAGGCAACCAAATCAGTCACAGGCTTCTGGTAATAGTACTGCTGAGCCAGCTGGTGCTAATGCCTCCGTGCCTCCTCGTAACCGTGTTGGACAAATTTCACACAGTGTTGTTCTTGGAACTTTTAATGTGGGGGACCAAGGAGAAGGCATTGTTCCTGACCTTACACGGGTTATTGGGGCAGTTTTGAATTCTATTGGAATTGGTGGTCAGAACACAAGTAGTCCTCCCAATGCTACCCAACCTGCTACAGCTCCGCTAGGGAATGAAGCTGCGGGCGTGAATTCTGGGAATCAAAATGCATCTGGAAATCAAGCACAGTCTGGCCAGACATTTCCTGGTCAGGCATTCCAATCTCTGCCTCATGTTGTTCAAATTCCTGTGGCTTCTGGGGCCATACCAATCCCTTCTCTCAATGCTCCAATTCCTGATTCATTGAACACACTCTCTGAATTTATAAATCGCATGGAACAGACACTATTGCTAAATGTTTATCAGTCAAATTTATCTTCAACTAATGCTGGAGATCAACGGGTTGAATTGCCTACCAATGCACAAGGGTTGCCGACAGTTGAAGCATTAAGCACCATCTTGCATCGTACAGAACAGTTGCTTAGTCATCAAGCTGTTGCTGCAATATCTCATATTGCTGGACGGTTGGAGCGAGAGGGAACTTCATCTGATTTAAGTATAAGGGATCAAATACAGTCAGAGGCAGCACACTTAGGACTTGCTATGCAGCATTTGGGCACACTTTTACTTGAGCTTGGCCGAACGATTTTAACCCTGCGTATGGGACAGTCTCCTGCAGAATCTGCTGTAAATGCTGGACCTGCAGTTTATATTTCTCCATCAGGGCCAAATCCTGTAATGGTTCAGCCCTTTCCTCTTCAGACAAACTCACTATTTGGTGGTCCTATTCCTTCTTCAACTCCTCCAGCATTTGGTGCCATTGGTATTGGAAGTGCTCCGCGGAATGTGAACATTCATATACATGCTGGTACTGCTCTTGCTCCCATTGTTTCAGCAATTAGTTCTAGGACAAATAATGGAGAAGGGACAAGAAATGAAAACCGTAATGAGCCTGGCCCTGGGGATTCAGGTTCTGCACGTGCGTTGCCCGTTAGAAATTTCATGTCGGCAGCCTTCCCATCTCACCCTCCTGGTGTTGGAGTTGCCAGTGGCACACAGACTGGGTCAGGTGTTTCTACTTCACAGCCACCACCTAATTCAACTCCATGGTCATCTGCTGCAAATGAATCGAATTTCTTTAGGAACTTAGTTCGTAATATACAAGGAGATAACACAGCTCCATCAGGTCAGATGGCATCAACTGGCCGAGACTTGTCTTCTGGTTCTGAATCAAGGTCTTCCCAGAGAGATGAGCAGGCAGATACCACCGGGATGAATGGCTTCAGAACTGCAACTGCATCCTCAGTTGGCTGTGGCTCTCTCCAAACTGAGTTAGTGCAAACCTGTGATAATGATGAGAGAGGTGTTTCAGTTGACAATTACCCTTCAAGTTCTTCCGGTCAAGGTTTACAAAGCTCTTCTGGTGGAGAAACAACAGTGAAATCAGAACAAGTAAAGGATGCTCCATCTGCAAGTGCGAAACAGGGTGTAGCTGAACCTGCCAGAGCTGCTCCTCTTGGATTGGGCATGGGTGGCTTAGAGCGTAAGAGGCGGACAGGACTTCAACCTCCTGTAAGTAAAGGCGCTGACATATCATCCGGTTCTTCTGTCAACCAAAGTCAGCAAACTGGAACAGAGGGTCAACACACATTACAAGCACTTCCAAGTCATGGCTCTTCTGTGAATGCAAGAAATCCTAATAGACCATCCCAGCAGCCGCTGCCCTCTAGTAATAGGCAGATTGATATGGCTGGTCTGATGTCTCAGGTTTTGCATAGCCCTGCTTTGAATGGTTTGCTTGAAGGGTTTTCACAGCAAACTGGGGTTGACTCACCTAATGGCTTGAGGAATATGTTGCAGCAGTTCACGCAGAGCCCACAGATGATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATATGGGAAATATGTTTGCCGGGATGGAAAGGGGGCAAGGGGGTGGCATTGATTTTTCGACGATTCTTCAACAGATGATGCCTATTGGATCCCGAGCGGCTGGTGGGGATACTCCTCCTCCACTATTCTCTGCTGCAGAACCTGAGACCTTGGCACCTTGCAGAGATGAAAACTCCAATAATACAACTTTACAGCTCAACCTTCAAGAAGTGGTGGATAGGATTGATCACTTGAGCCCACCAGCAGATGTTTTTCGTGCTGTGGCTGAAAATGCCGTCCTGGTATCTGGGGGTGTAAATGTTACCGATGATATTCTGGATGAGTTATGCAGTAATGAGAGTCTTGCCAGCGAATATTTGGAGACGTTGCGATATGATGTGAGACAGCGGCTAGATGGACATTCTGAGCAGGACAAGTCGTAA 2760 0.462 MASQGSNEGSSSGITSAECSDSTVQLNIKTLDSRVYNFQLDKNMPVSLLKEKIANEIGLPVGQQRLIFRGKVLKDEHVLSEYHIENGHTLHLVERQPNQSQASGNSTAEPAGANASVPPRNRVGQISHSVVLGTFNVGDQGEGIVPDLTRVIGAVLNSIGIGGQNTSSPPNATQPATAPLGNEAAGVNSGNQNASGNQAQSGQTFPGQAFQSLPHVVQIPVASGAIPIPSLNAPIPDSLNTLSEFINRMEQTLLLNVYQSNLSSTNAGDQRVELPTNAQGLPTVEALSTILHRTEQLLSHQAVAAISHIAGRLEREGTSSDLSIRDQIQSEAAHLGLAMQHLGTLLLELGRTILTLRMGQSPAESAVNAGPAVYISPSGPNPVMVQPFPLQTNSLFGGPIPSSTPPAFGAIGIGSAPRNVNIHIHAGTALAPIVSAISSRTNNGEGTRNENRNEPGPGDSGSARALPVRNFMSAAFPSHPPGVGVASGTQTGSGVSTSQPPPNSTPWSSAANESNFFRNLVRNIQGDNTAPSGQMASTGRDLSSGSESRSSQRDEQADTTGMNGFRTATASSVGCGSLQTELVQTCDNDERGVSVDNYPSSSSGQGLQSSSGGETTVKSEQVKDAPSASAKQGVAEPARAAPLGLGMGGLERKRRTGLQPPVSKGADISSGSSVNQSQQTGTEGQHTLQALPSHGSSVNARNPNRPSQQPLPSSNRQIDMAGLMSQVLHSPALNGLLEGFSQQTGVDSPNGLRNMLQQFTQSPQMMNTVNQIVQQVGSQDMGNMFAGMERGQGGGIDFSTILQQMMPIGSRAAGGDTPPPLFSAAEPETLAPCRDENSNNTTLQLNLQEVVDRIDHLSPPADVFRAVAENAVLVSGGVNVTDDILDELCSNESLASEYLETLRYDVRQRLDGHSEQDKS 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01748 919 FunFam Large proline-rich protein BAG6 16 109 - -
Arst6g01748 919 MobiDBLite consensus disorder prediction 440 511 - -
Arst6g01748 919 MobiDBLite consensus disorder prediction 663 715 - -
Arst6g01748 919 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Arst6g01748 919 MobiDBLite consensus disorder prediction 484 511 - -
Arst6g01748 919 MobiDBLite consensus disorder prediction 440 456 - -
Arst6g01748 919 MobiDBLite consensus disorder prediction 162 206 - -
Arst6g01748 919 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 918 - -
Arst6g01748 919 SMART ubq_7 24 95 IPR000626 GO:0005515
Arst6g01748 919 MobiDBLite consensus disorder prediction 96 120 - -
Arst6g01748 919 Gene3D - 14 108 - -
Arst6g01748 919 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Arst6g01748 919 CDD Ubl_ubiquitin_like 26 93 - -
Arst6g01748 919 PRINTS Ubiquitin signature 76 97 IPR019956 -
Arst6g01748 919 PRINTS Ubiquitin signature 55 75 IPR019956 -
Arst6g01748 919 MobiDBLite consensus disorder prediction 525 565 - -
Arst6g01748 919 MobiDBLite consensus disorder prediction 590 626 - -
Arst6g01748 919 MobiDBLite consensus disorder prediction 96 112 - -
Arst6g01748 919 SUPERFAMILY Ubiquitin-like 13 98 IPR029071 -
Arst6g01748 919 MobiDBLite consensus disorder prediction 590 715 - -
Arst6g01748 919 MobiDBLite consensus disorder prediction 525 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01748 Arst-Chr6 18174767 18181756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01748 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 1.68e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01748 - - gmx:100783611 1234.94