Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01744 ATGATCAGACCAATCAACAAAAGGATATCGGGATTCAACTGGGAGTCGCACAAGTACAATTGGTGGGAGAATCTAGAGAGCAAAGTTGGAGAGATAGCCAAAGCTGGATTCACTTCCGTTTGGTTGCCACCACCAACTCATTCCTTCTCACCTCAAGGCTACACTCCACAGAACCTTTACTCACTCAACACTAATTATGGCTCCGAGCATCACTTGAAAGCTCTGCTTGCTAAGATGAAGCAACACAAACTCAGATCCATGGCTGATATTGTCATCAATCATCGTGTTGGCACCACCCAGGGACGTGGAGGAATCTACAACCGTTTTGATGGAATCCCACTCTCTTGGGATGAACATGCTGTCACTTCGGATACTGGTGGACTTGGTAACAGAAAGACCGGCGCCATATTCCAGGGGTTCCCCAATATTGACCACACCCAAGACTTTGTGAGAAAGGATATCATAGGTTGGCTAAGATGGCTGCGCCATAACGTAGGCTTTGAGGATTTTCGTTTTGATTTTGCAAAAGGGTTTTCAGCAAAATATGTGAAAGAATATATAGAAGCAGCAAAGCCATTGTTCTGTGTAGGGGAGTACTGGGATTCTTGCAACTACAGAGGTTCTTCTTTGGACTATAACCAGGACAGCCATAGGCAGCGAATAATCAATTGGATTGATGGCACTGGACAGCTTTCAGCTGCATTTGACTTCACAACAAAAGGAATTCTCCAGGAAGCTGTGAAGGGAGAATTTTGGCGTCTGCGTGATGGTCAAGGGAAGCCGCCCGGTGTGATGGGATGGTGGCCTTCAAGATCAGTCACGTTTGTGGACAATCATGATACTGGCTCCACTCAGGCTCATTGGCCGTTCCCCTCTGACCATATTATGGAGGGATATGCATACATATTGACTCATCCTGGGATACCAACAGTTTTCTATGACCACTTGTTTGAGTGGGGCAACTCCATTCGTAACCAGATAGCGAAGCTGATTGATGTACGGAAGCGGGAAGGTATTGAGAGTAGATCATCGATGAGGATATTGGAAGCGAAACAAAACCTATATTCAGCGATAATCGGAGACAAGGTGTGCATGAAGATTGGAAGTGCCTCATGGTGTCCATCTGCATCTCACACCCAGTGGGAACTAGCAACCTCTGGCCACAATTATGCTGTATGGCGCAAGCAGTAG 1191 0.4635 MIRPINKRISGFNWESHKYNWWENLESKVGEIAKAGFTSVWLPPPTHSFSPQGYTPQNLYSLNTNYGSEHHLKALLAKMKQHKLRSMADIVINHRVGTTQGRGGIYNRFDGIPLSWDEHAVTSDTGGLGNRKTGAIFQGFPNIDHTQDFVRKDIIGWLRWLRHNVGFEDFRFDFAKGFSAKYVKEYIEAAKPLFCVGEYWDSCNYRGSSLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGEFWRLRDGQGKPPGVMGWWPSRSVTFVDNHDTGSTQAHWPFPSDHIMEGYAYILTHPGIPTVFYDHLFEWGNSIRNQIAKLIDVRKREGIESRSSMRILEAKQNLYSAIIGDKVCMKIGSASWCPSASHTQWELATSGHNYAVWRKQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01744 396 SUPERFAMILY (Trans)glycosidases 14 326 IPR017853 -
Arst6g01744 396 PRINTS Alpha-amylase signature 270 282 IPR006046 GO:0004556|GO:0005975|GO:0043169
Arst6g01744 396 PRINTS Alpha-amylase signature 21 38 IPR006046 GO:0004556|GO:0005975|GO:0043169
Arst6g01744 396 PRINTS Alpha-amylase signature 83 94 IPR006046 GO:0004556|GO:0005975|GO:0043169
Arst6g01744 396 PRINTS Alpha-amylase signature 167 178 IPR006046 GO:0004556|GO:0005975|GO:0043169
Arst6g01744 396 Pfam Alpha-amylase C-terminal beta-sheet domain 336 394 IPR012850 GO:0004556|GO:0005509|GO:0005975
Arst6g01744 396 Gene3D - 339 395 IPR013780 -
Arst6g01744 396 Gene3D Glycosidases 9 338 - -
Arst6g01744 396 PIRSF Alpha-amylase_plant 6 396 IPR013775 GO:0004556|GO:0005509|GO:0005975
Arst6g01744 396 SMART alpha-amyl_c2 335 395 IPR012850 GO:0004556|GO:0005509|GO:0005975
Arst6g01744 396 SMART aamy 11 334 IPR006047 GO:0005975
Arst6g01744 396 Pfam Alpha amylase, catalytic domain 31 95 IPR006047 GO:0005975
Arst6g01744 396 PANTHER ALPHA-AMYLASE 12 394 - -
Arst6g01744 396 CDD AmyAc_arch_bac_plant_AmyA 11 344 - -
Arst6g01744 396 SUPERFAMILY Glycosyl hydrolase domain 341 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01744 Arst-Chr6 18083670 18086972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01744 9 395 Glycoside Hydrolase AT1G76130 74.677 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01744 K01176 - gmx:100813490 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01744 6 18083670 18086972 Arst6g01744 6 18083670 18086972 ECH