Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01728 ATGGGGCAGTGCTTCACTAAATCCCAAAGTAATAACAGAATCCCAATCTCATATGAACCCGATTCACCGCCGCCGCCGCCAAACAGAAGCAAACAAGGCGTGCCAGCATACCGTCCAGCAAAATCAGAGGCGGCCTCGTCGTCATCCATCATAGGGAAGGCTTTGACGGACATAAACGAATTGTACAGGCTGGAGAGGGAGCTGGGAAGGGGGCAGTTCGGCGTGACGTACCTGTGCACGGAGAAGGCGACAGGAAGACAATACGCGTGCAAGTCGATAGCGAGAAGAAAGGTGACGCGGAAGAACGAGATGGATGACGTGAAGAGGGAGATAATGATCCTTCAGCACCTGACGGGGCAGCCCAACATCGTGGAGTTCAAGGGAGCCTACGAGGACAGGCAGCACGTGCATTTGGTGATGGAGTTGTGCCGCGGCGGCGAACTCTTCGACAGGATCATAGCCAGGGGGAGTTACTCTGAGAGGGAGGCTGCTTCCATATGCAGGCAGATCGTCAATGTGGTTCATGTTTGCCACTTCATGGGTGTCATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTGGTTAGTAGGGATCACAATGCTCCTTTGAAAGCCACCGATTTTGGTTTGTCTGTCTTCATTGAAGAAGATAAAGTGTACAAAGAAATAGTTGGAAGTGCATACTATGTGGCTCCGGAGGTGCTGAAACGCAATTATGGAAAGGAGATAGATGTGTGGAGTGCTGGAGTCATTCTATACATTCTCTTAAGCGGGGTGCCCCCATTTTGGGGTGAAACTGAGAAGCAGATCTTTGATGCTATCTTGGAAGGGAAATTAGATCTAGAAAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTAGCCTATGAACCTAAGAAACGCATCACAGCTTCTGCTGCCCTTGAACACCCTTGGATGAAGGAAGGGGGGGAAGCATCTGACAAGCCTATAGACAATGCGGTTTTAAGTAGGATGAAACAATTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTGATAGCACAAAACCTTTCAGAGGAAGAAATCAAGGGCCTGAAACAAATGTTCAACAATATGGATACGGATCGCAGCGGCACAATCACTTTCGAAGAACTGAAATCTGGTTTGTCCAGATTGGGATCCAAGCTTTCTGAAACTGAAATAAGGCAGCTAATGGATGCTGCTGATGTTGATAAGAATGGAACCATTGACTATTATGAATTCATTACTGCCACCATGCATCGGCATAAACTTGAGAAGGAAGAAAATTTGTATAAGGCTTTTCAATACTTTGACAAGGATAGCAGCGGTTACATAACAAGAGATGAGCTTAGACATGCTTTGACTGAATATCAAATGGGAGATGAAGCAACTATTGATGAAGTCATTGATGACGTTGACACTGACAAGGATGGGAAGATCAACTACGAGGAGTTCGTGGCTATGATGAGGAAGGGGACATTGGATAATGAAGGGGTTATCGGCAAAGAGAGAACACGATAA 1551 0.4629 MGQCFTKSQSNNRIPISYEPDSPPPPPNRSKQGVPAYRPAKSEAASSSSIIGKALTDINELYRLERELGRGQFGVTYLCTEKATGRQYACKSIARRKVTRKNEMDDVKREIMILQHLTGQPNIVEFKGAYEDRQHVHLVMELCRGGELFDRIIARGSYSEREAASICRQIVNVVHVCHFMGVMHRDLKPENFLLVSRDHNAPLKATDFGLSVFIEEDKVYKEIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLSGVPPFWGETEKQIFDAILEGKLDLESAPWPSISAAAKDLIRKMLAYEPKKRITASAALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAQNLSEEEIKGLKQMFNNMDTDRSGTITFEELKSGLSRLGSKLSETEIRQLMDAADVDKNGTIDYYEFITATMHRHKLEKEENLYKAFQYFDKDSSGYITRDELRHALTEYQMGDEATIDEVIDDVDTDKDGKINYEEFVAMMRKGTLDNEGVIGKERTR 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01728 516 Gene3D - 328 504 - -
Arst6g01728 516 Gene3D Transferase(Phosphotransferase) domain 1 148 327 - -
Arst6g01728 516 SUPERFAMILY EF-hand 359 500 IPR011992 -
Arst6g01728 516 ProSiteProfiles Protein kinase domain profile. 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01728 516 ProSitePatterns EF-hand calcium-binding domain. 483 495 IPR018247 -
Arst6g01728 516 SMART serkin_6 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01728 516 ProSiteProfiles EF-hand calcium-binding domain profile. 399 434 IPR002048 GO:0005509
Arst6g01728 516 MobiDBLite consensus disorder prediction 18 32 - -
Arst6g01728 516 SUPERFAMILY Protein kinase-like (PK-like) 62 327 IPR011009 -
Arst6g01728 516 ProSiteProfiles EF-hand calcium-binding domain profile. 435 469 IPR002048 GO:0005509
Arst6g01728 516 Pfam EF-hand domain pair 368 428 IPR002048 GO:0005509
Arst6g01728 516 Pfam EF-hand domain pair 437 500 IPR002048 GO:0005509
Arst6g01728 516 ProSiteProfiles EF-hand calcium-binding domain profile. 363 398 IPR002048 GO:0005509
Arst6g01728 516 Pfam Protein kinase domain 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01728 516 ProSiteProfiles EF-hand calcium-binding domain profile. 470 505 IPR002048 GO:0005509
Arst6g01728 516 FunFam calcium-dependent protein kinase 1 148 327 - -
Arst6g01728 516 PANTHER SERINE/THREONINE-PROTEIN KINASE 56 495 - -
Arst6g01728 516 SMART efh_1 367 395 IPR002048 GO:0005509
Arst6g01728 516 SMART efh_1 474 502 IPR002048 GO:0005509
Arst6g01728 516 SMART efh_1 439 467 IPR002048 GO:0005509
Arst6g01728 516 SMART efh_1 403 431 IPR002048 GO:0005509
Arst6g01728 516 Gene3D Phosphorylase Kinase; domain 1 64 147 - -
Arst6g01728 516 MobiDBLite consensus disorder prediction 1 42 - -
Arst6g01728 516 FunFam Calcium-dependent protein kinase 1 64 147 - -
Arst6g01728 516 MobiDBLite consensus disorder prediction 1 17 - -
Arst6g01728 516 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Arst6g01728 516 FunFam Calcium-dependent protein kinase 1 328 503 - -
Arst6g01728 516 CDD STKc_CAMK 62 319 - -
Arst6g01728 516 ProSitePatterns EF-hand calcium-binding domain. 376 388 IPR018247 -
Arst6g01728 516 ProSitePatterns EF-hand calcium-binding domain. 412 424 IPR018247 -
Arst6g01728 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01728 Arst-Chr6 17877512 17880936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01728 1 502 EF-hand Containing Proteins AT3G20410 66.855 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst6g01728 Pkinase 7.8e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01728 K13412 - qsa:O6P43_018724 761.14