Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01727 ATGGGACTGGGGCTGTTCAGGATGTTCAACTGCTTCAGTAGTAAGCCCCGTGAAATTCCGATTATTCTAGGGTCGGAGACGCCGCCGCGGCCAAAGCAGAGGCAGCGGAAAGAAGAGTTGGGGGGCGGGGGGGAGTCAAAGATAGGAGGAATCCTGGGGAGGCCATACGTGGACATAAATACGATGTACGAGATGAAGAAGGAGCTGGGAAGAGGGCAGTCAGGGGTGACATACCTGTGCATAGAGAGGTCGACGGGGAGGGAATACGCATGCAAGACGATTGCAAGAGGGAAGCTGGTGAGGAAGGAAGAGATAGAAGACGTGAGGAGGGAGATAATGATACTGCAGCACCTGTCAGGGCAGCCCAACATAGTGGAGTTTCGTGGGGCATATGAAGACAGGCAGAACGTGCACGTGGTGATGGAGCTTTGCAGCGGAGGGGAGCTGTTTGACAGGATCATAGACAAGGGCACCTACTCCGAGAGGGAGGCTGCCCGCTTGATGAGGCAGATTGTCACCGTCGTCCATGTTTGCCACTTCATGGGCGTCATCCACAGAGACCTTAAGCCTGAGAACTTCTTGCTTGCCTCTAAGGACCCCCTTGCTCCCCTTAAAGCTACTGATTTTGGCGTCTCCGTTTTCATTGAGCAAGATAAAGTGTACAAAGAAATAGTTGGAAGTGCATACTATGTGGCTCCGGAGGTGCTGAAACGCAATTATGGAAAGGAGATAGATGTGTGGAGTGCTGGAGTCATTCTATACATTCTCTTAAGCGGGGTGCCCCCATTTTGGGGTGAAACTGAGAAGCAGATCTTTGATGCTATCTTGGAAGGGAAATTAGATCTAGAAAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTAGCCTATGAACCTAAGAAACGCATCACAGCTTCTGCTGCCCTTGAACACCCTTGGATGAAGGAAGGGGGGGAAGCATCTGACAAGCCTATAGACAATGCGGTTTTAAGTAGGATGAAACAATTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTGATAGCACAAAACCTTTCAGAGGAAGAAATCAAGGGCCTGAAACAAATGTTCAACAATATGGATACGGATCGCAGCGGCACAATCACTTTCGAAGAACTGAAATCTGGTTTGTCCAGATTGGGATCCAAGCTTTCTGAAACTGAAATAAGGCAGCTAATGGATGCTGCTGATGTTGATAAGAATGGAACCATTGACTATTATGAATTCATTACTGCCACCATGCATCGGCATAAACTTGAGAAGGAAGAAAATTTGTATAAGGCTTTTCAATACTTTGACAAGGATAGCAGCGGTTACATAACAAGAGATGAGCTTAGACATGCTTTGACTGAATATCAAATGGGAGATGAAGCAACTATTGATGAAGTCATTGATGACGTTGACACTGACAAGGATGGGAAGATCAACTACGAGGAGTTCGTGGCTATGATGAGGAAGGGGACATTGGATAATGAAGGGGTTATCGGCAAAGAGAGAACACGATAA 1554 0.4704 MGLGLFRMFNCFSSKPREIPIILGSETPPRPKQRQRKEELGGGGESKIGGILGRPYVDINTMYEMKKELGRGQSGVTYLCIERSTGREYACKTIARGKLVRKEEIEDVRREIMILQHLSGQPNIVEFRGAYEDRQNVHVVMELCSGGELFDRIIDKGTYSEREAARLMRQIVTVVHVCHFMGVIHRDLKPENFLLASKDPLAPLKATDFGVSVFIEQDKVYKEIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLSGVPPFWGETEKQIFDAILEGKLDLESAPWPSISAAAKDLIRKMLAYEPKKRITASAALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAQNLSEEEIKGLKQMFNNMDTDRSGTITFEELKSGLSRLGSKLSETEIRQLMDAADVDKNGTIDYYEFITATMHRHKLEKEENLYKAFQYFDKDSSGYITRDELRHALTEYQMGDEATIDEVIDDVDTDKDGKINYEEFVAMMRKGTLDNEGVIGKERTR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01727 517 MobiDBLite consensus disorder prediction 21 47 - -
Arst6g01727 517 ProSitePatterns Protein kinases ATP-binding region signature. 69 102 IPR017441 GO:0005524
Arst6g01727 517 CDD STKc_CAMK 63 320 - -
Arst6g01727 517 SUPERFAMILY Protein kinase-like (PK-like) 63 328 IPR011009 -
Arst6g01727 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Arst6g01727 517 SUPERFAMILY EF-hand 360 501 IPR011992 -
Arst6g01727 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 60 496 - -
Arst6g01727 517 SMART serkin_6 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01727 517 FunFam Calcium-dependent protein kinase 1 65 148 - -
Arst6g01727 517 Pfam Protein kinase domain 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01727 517 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Arst6g01727 517 SMART efh_1 368 396 IPR002048 GO:0005509
Arst6g01727 517 SMART efh_1 475 503 IPR002048 GO:0005509
Arst6g01727 517 SMART efh_1 404 432 IPR002048 GO:0005509
Arst6g01727 517 SMART efh_1 440 468 IPR002048 GO:0005509
Arst6g01727 517 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Arst6g01727 517 Gene3D Phosphorylase Kinase; domain 1 65 148 - -
Arst6g01727 517 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Arst6g01727 517 FunFam Calcium-dependent protein kinase 1 329 504 - -
Arst6g01727 517 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Arst6g01727 517 Gene3D Transferase(Phosphotransferase) domain 1 149 328 - -
Arst6g01727 517 FunFam calcium-dependent protein kinase 1 149 328 - -
Arst6g01727 517 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Arst6g01727 517 Gene3D - 329 505 - -
Arst6g01727 517 Pfam EF-hand domain pair 369 429 IPR002048 GO:0005509
Arst6g01727 517 Pfam EF-hand domain pair 438 501 IPR002048 GO:0005509
Arst6g01727 517 ProSiteProfiles EF-hand calcium-binding domain profile. 436 470 IPR002048 GO:0005509
Arst6g01727 517 ProSiteProfiles Protein kinase domain profile. 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01727 517 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01727 Arst-Chr6 17876578 17880936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01727 46 504 EF-hand Containing Proteins AT3G20410 72.113 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst6g01727 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01727 K13412 - gmx:100816157 780.4