Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01700 ATGGGTTCCTTATTGTTTTCCTATTACTGTTTCTCTACACAGATTGCATTCATCTTGTTTCTATTTTGCTTGGATAAAGGAGCATTAGGGGCCAAGTTTACAATAATTAACAAGTGTGATTACACGGTGTGGCCTGGGATTCTTGCCAATGCTGGCAGCTCCGCATTGGATACCACCGGCTTCCACCTCCCATCCGGCGGGTCGAGGAGCTTTCAAGCCCCACCCAATTGGTCAGGCAGGTTTTGGGGCCGGACCGGCTGCAATTTTGACCCCAATACCCAACAGGGCACCTGCACCACAGGGGATTGTGGCTCCAACAAACTTGAATGCAATGGTGCCGGGGCAGACCCACCCGTAACACTAGCGGAGTTCACAATCGGGTCGGGTTCCCAATCCCAGGATTATTACGACGTCAGCCTGGTTGACGGATACAATCTTCCTATGATGGTGGATGCGGGTGGCGGGTCGGGTGAGTGTGGGTCAACGGGTTGCATAGCTGACCTGAACCGGCAATGCCCGAATGAGTTGAGAGTTAGTAACCGAGTGGCATGCAAGAGCGCGTGTGAAGCGTTTCAGAGGGCTGAATACTGCTGCAGCGGCACCTACGCTTCACCTGCCACATGCAAGCCTTCGGTTTACTCCACCATGTTCAAGAGCGCGTGCCCCAAATCGTATAGCTACGCATATGACGACCTTACGAGTACATTTACGTGTACGGGAGCTGATTATACCATCACATTCTGCCCTTCAACCACAAGGTAA 762 0.521 MGSLLFSYYCFSTQIAFILFLFCLDKGALGAKFTIINKCDYTVWPGILANAGSSALDTTGFHLPSGGSRSFQAPPNWSGRFWGRTGCNFDPNTQQGTCTTGDCGSNKLECNGAGADPPVTLAEFTIGSGSQSQDYYDVSLVDGYNLPMMVDAGGGSGECGSTGCIADLNRQCPNELRVSNRVACKSACEAFQRAEYCCSGTYASPATCKPSVYSTMFKSACPKSYSYAYDDLTSTFTCTGADYTITFCPSTTR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01700 253 FunFam THAUMATIN-LIKE PROTEIN 1 31 249 - -
Arst6g01700 253 SMART tha2 33 249 IPR001938 -
Arst6g01700 253 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Arst6g01700 253 PRINTS Pathogenesis-related protein signature 80 91 IPR001938 -
Arst6g01700 253 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Arst6g01700 253 PRINTS Pathogenesis-related protein signature 134 150 IPR001938 -
Arst6g01700 253 PIRSF PR5 5 253 IPR001938 -
Arst6g01700 253 PANTHER OS03G0233200 PROTEIN 17 249 IPR001938 -
Arst6g01700 253 CDD TLP-PA 32 248 - -
Arst6g01700 253 Gene3D Thaumatin 31 249 IPR037176 -
Arst6g01700 253 ProSiteProfiles Thaumatin family profile. 30 249 IPR001938 -
Arst6g01700 253 SUPERFAMILY Osmotin, thaumatin-like protein 32 250 IPR037176 -
Arst6g01700 253 Pfam Thaumatin family 37 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01700 Arst-Chr6 17534788 17536144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01700 11 250 Receptor kinase-like Gene Family AT5G38280 48.594 4.62e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01700 - - gmx:100786772 413.305