Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01637 ATGGCAGGTTTATTCTCTCTAGGTCCACATCATAGCAAACAAGAAGAACAAGATCAAGAAGAAAACAACAACAACAACAGCAACATCCAATTGCTATTGAGAAACGAAGAGATCTACACCAATAGCAGCACCACCAACACCAACACCAACAGAGGGTTCGAGATATGGCCTCATCATCATCAACCGAGCTACTACTCCTTCGGTTTGGGTCCATCTAGTGAGAGAAACACCACCACCACAAACCTAAACGACGACGTTTCGGTGTCTTTCTCTGATGAGTCTAATCGGTTCGGGTTCACCGTGATGAGATCTTCTTCTTCTGGATCGGGTTTAGGAAGCGGCACCAATTGCCAAGACTGCGGTAACCAAGCCAAGAAAGACTGCCTCCACCTTCGCTGCCGAACCTGCTGCCGAAGCCGAGGGTTTCAATGTTCTACTCACGTCAAAAGCACCTGGGTTCCTGCTGCCAAACGACGCGAGCGCCAACACACTCTCGCGTCGTTACAGCAGCAGCAACCCGGGAGAGCAGGAGAAGGAGAAGGAGGAGGCGATGTTCACTCTAGACGAAGTAGAGAAGCCTCCGCTTGTGTTCCCATGCCGATTACTACTACAGGGTTGGAACTAGGGCAATTCCCTCCGGAGTTGAACTCACCGGCGGTGTTCCGGTGCGTCAAAGTCAGCCCAATGGACGCACCTGATGAGAGGTACGCGTATCAAACGGCTGTCAATATAGGAGGCCATGTTTTCAAGGGGATTCTCTACGATCAAGGTCCAGATGGTCCTTTCGCCACCAATGCCGCCGCCGCCGGTGAAGGTTCCTCCCATGGAGGAGGTGAGCCTCATCATCAACAACTCAGTCTCATAACAACCACCAGCGGTGCCGGCATCACATTTGACCCTTCACAGCTTTATCCGGCGCCGATGAATGCTTTCATGGCCGGTACGCAATTCTTTCCGCCCCCGAGAACCTAG 972 0.5206 MAGLFSLGPHHSKQEEQDQEENNNNNSNIQLLLRNEEIYTNSSTTNTNTNRGFEIWPHHHQPSYYSFGLGPSSERNTTTTNLNDDVSVSFSDESNRFGFTVMRSSSSGSGLGSGTNCQDCGNQAKKDCLHLRCRTCCRSRGFQCSTHVKSTWVPAAKRRERQHTLASLQQQQPGRAGEGEGGGDVHSRRSREASACVPMPITTTGLELGQFPPELNSPAVFRCVKVSPMDAPDERYAYQTAVNIGGHVFKGILYDQGPDGPFATNAAAAGEGSSHGGGEPHHQQLSLITTTSGAGITFDPSQLYPAPMNAFMAGTQFFPPPRT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01637 323 Pfam Domain of unknown function (DUF702) 114 259 - -
Arst6g01637 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 309 IPR007818 GO:0003700|GO:0006355
Arst6g01637 323 NCBIfam LRP1 C-terminal domain 210 258 IPR006511 -
Arst6g01637 323 NCBIfam putative zinc finger domain, LRP1 type 116 158 IPR006510 -
Arst6g01637 323 MobiDBLite consensus disorder prediction 155 196 - -
Arst6g01637 323 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01637 Arst-Chr6 16826877 16828617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01637 1 323 C2H2 Transcription Factor Family AT1G75520 41.918 6.72e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Arst6g01637 DUF702 2.9e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01637 - - gmx:100807290 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01637 6 16826877 16828617 Arst8g00141 8 1565768 1568288 PCT