Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01619 ATGTATCAGAACCAGGCCTTTCCTTCAGGATCCTATGAAGAAATGTTATCTGGGAATTCCCTATTAACTCATCATAACTATGGCGATTCGGTTGGAGGAGGAGGACACAACAATGAGCTGAAGTTCATCACCTCTCTAGGTGAATCAATGACTATGCAGCCTCTTGAAGAGCATTCCAATGCTGCTGCGACCGGCAATCCATCTTGCAACTCTTTTGGTGATCAAAACATTCAGTGCCAAGGTTTGTCGCTTAGCCTTGGATCGGTTATGCCTTCTATTGCAACATCAATGCCTCATCACTTTCAATACCCGCAGTATCACAACTCTAGCTTCACTTCACTGATGAATGCCATGCCAAACTTAAAGGGAAATAATGGATCATCTCTTAAGGATGATGAGGTGAGAAACACCGAATGCATGACCCCGCCAATGTCTTCCGGAGGATTCTACAACTCTATAAAGAGGGAAGGTTTGTATAACAATACTAATCATCCTTCAATGTGCCTCAGCGAAGGCCAGGTTGATCCAGGCCTACACGGATCGGCTGGTTTTTCCTCCAGTACTGCCTTAAACTCACAATACCTGAAGGCAGCACAGGAGTTGCTTGATGAAATAGTTAATGTTCGAAAGGCTTTGAAGCAACCCGGATTGGAGAAACAACAGAGTTTTCGTGATGCCGGATTAGATGGCTCCAAAGATTCTGATGGAAAATCTAATAGTCAATCTATGCAAGTATCTTCAGGTGCCAATGGTTCTGCTGTAAACTCTTCAACCGAGCTATCGCCGGCAGACCGACAGAATTTGTTGGACAAGAAGACAAAACTTTTGGCTATGTTAGATGAGGTAGATAAAAGATACAGACAGTATTGCCATCAAATGCAAATTGTGGTATCATCATTTGATATGGTTGCCGGGTGTGGAGCTGCCGAACCATACACTGCGCTTGCATTGCGCACAATTTCACGCCACTTTCGATGTTTGCGCGACGCCATCAGTGGCCAGATTCAAGTGACTCAGAGGAGCCTTGGAGAGCAAGAGGGAATACCTCGGCTCCGCTACGTCGATCAGCAACTAAGGCAACAAAAGGCACTTCAGCAACTTGGTGTGATGAGGCAAGCTTGGAGACCTCAGAGGGGACTTCCTGAGAGCTCTGTTTCTATACTTCGCGCGTGGCTATTCGAGCATTTCCTTCATCCTTATCCAAAGGATTCAGAGAAGATTATGCTGGCAAGGCAAACAGGCTTGACCAGAAACCAGGTGGCAAATTGGTTCATAAATGCAAGGGTGCGGCTATGGAAGCCAATGGTTGAAGAAATGTATAAAGAAGAATTTGGTGATTCTGAGATGAGTTGCAACCTCTTATCTGAAAACACCATACCAAAAGCTTCAAGAGATGATGTTCAAGTTTCTGATAATAACAAAAGAGAAGAATCACAAGAAAATTTGGCAGCTGTTGATGATAGTGTTCAACATGGTATCCAAAGTAGTGATTATGGTGAAAACCTCATGGATTCTTCTTCTTCAAGGACTAGTAGGAAATTGCAACAATGTGATCAAAGATTTAACATGAAAAACACACCGTTTTCAAATGCTTCTACAATACAAATCAATCACCATAATGGTCATGATGATGGTAATGGTTGCTTAGCTTCTACTCATGCAACATATGATTATTCCGCGTTGGGAAACTTTGCGGCCGTTGGTGGCCATGTGTCCCTTGCGCTCGAGTTGAGGAACCGCGAGAGCAATGGATTAGGCATGTCAAATGGTGATGAGATACACAACAAAAGAAGTAGTAACCAGACTTTGGCTTCTTCATCTGAGAATGATTTGTTGGATTATCATTTGACAGAACAAGAGAAGCAACAGCAACAACAACACAAGTTTGGAAATCCACAACAACGGTTGTTACACGAGTTTGTTGTTTGA 1929 0.4329 MYQNQAFPSGSYEEMLSGNSLLTHHNYGDSVGGGGHNNELKFITSLGESMTMQPLEEHSNAAATGNPSCNSFGDQNIQCQGLSLSLGSVMPSIATSMPHHFQYPQYHNSSFTSLMNAMPNLKGNNGSSLKDDEVRNTECMTPPMSSGGFYNSIKREGLYNNTNHPSMCLSEGQVDPGLHGSAGFSSSTALNSQYLKAAQELLDEIVNVRKALKQPGLEKQQSFRDAGLDGSKDSDGKSNSQSMQVSSGANGSAVNSSTELSPADRQNLLDKKTKLLAMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMSCNLLSENTIPKASRDDVQVSDNNKREESQENLAAVDDSVQHGIQSSDYGENLMDSSSSRTSRKLQQCDQRFNMKNTPFSNASTIQINHHNGHDDGNGCLASTHATYDYSALGNFAAVGGHVSLALELRNRESNGLGMSNGDEIHNKRSSNQTLASSSENDLLDYHLTEQEKQQQQQHKFGNPQQRLLHEFVV 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01619 642 CDD homeodomain 374 435 IPR001356 GO:0003677
Arst6g01619 642 Pfam Homeobox KN domain 391 430 IPR008422 GO:0003677|GO:0006355
Arst6g01619 642 MobiDBLite consensus disorder prediction 586 606 - -
Arst6g01619 642 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 110 470 - -
Arst6g01619 642 MobiDBLite consensus disorder prediction 233 264 - -
Arst6g01619 642 Gene3D - 371 448 - -
Arst6g01619 642 MobiDBLite consensus disorder prediction 217 265 - -
Arst6g01619 642 MobiDBLite consensus disorder prediction 483 514 - -
Arst6g01619 642 SUPERFAMILY Homeodomain-like 375 441 IPR009057 -
Arst6g01619 642 ProSiteProfiles 'Homeobox' domain profile. 371 434 IPR001356 GO:0003677
Arst6g01619 642 MobiDBLite consensus disorder prediction 461 514 - -
Arst6g01619 642 SMART HOX_1 374 438 IPR001356 GO:0003677
Arst6g01619 642 MobiDBLite consensus disorder prediction 467 482 - -
Arst6g01619 642 SMART prehox3 182 333 IPR006563 -
Arst6g01619 642 Pfam Associated with HOX 190 332 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01619 Arst-Chr6 16617977 16622338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01619 182 458 Homeobox Transcription Factor Family AT2G16400 63.194 7.66e-113 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst6g01619 POX 4.2e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01619 - - gmx:100775682 769.229