Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01594 ATGTCCGGTTCGCTCGATCGGTTCGCACGCCCTTGCTTTGAAGGTTTTTCTGGTCATGATGAAAGGAGAGAGCGGAAATCAGATTTCGAGAACTCAGAAGACGATCGGCGGACGCGAATTGGCAGCCTGAAGAAGAAGGCCATCAATGCGTCCAGCAAATTCAGACATTCTCTTAGGAAGAAGAGCAGCCGGAGGAAGAGCACTGGCCGGACCAATTCGGTCTCCATTGAGGATGTTCGAGATGTTAAGGAGCTCCAGGCAGTGGAGTCATTTCGGCAGGCTCTTATGTCGGATAACTTGTTGCCAACGAGACATGATGACTACCATATGTTGTTGAGATTCTTGAAAGCAAGGAAATTTGATATCGAGAAAGCAAAGCACATGTGGGCTAACATGCTCCAATGGAGGAAAGACTACGGCACTGATACAATCATAGAGGATTTTGAGTTCTCTGAGTTGAATGAAGTCCTACAGTACTATCCACATGGTTATCACGGAGTGGACAAGGAAGGAAAACCCGTCTATATTGAAAGGCTAGGTAAAGTTGATCCCAATAAGCTTATGCAAGTAACTACAATGGAAAGGTATTTGAGATACCATGTTCAGGGTTTTGAGAAAACGTTTGCTCTTAAGTTTCCTGCATGTTCTATTGCCGCAAAGAGACATATCGATTCGAGCACAACCATTTTGGATGTTCACGGCGTGGGTTTCAAAAACCTAACCAAATCTGCGCGGGAACTCATCATGCGGCTGCAGAAGATTGATGGTGACTACTATCCGGAAACATTATGCAGAATGTTTATAATCAATGCTGGCCCTGGTTTTAAGCTACTCTGGAACACTATCAAATCATTTATTGATCCAAAAACAACTTCAAAGATAAATGTTCTGGGAAACAAGTTTCAGAATAAATTACTTGAATTTATTGATGCAAGTGAGCTGCCAGAATTTCTTGGCGGTATTTGTAATTGTGCAGATCAAGGTGGTTGCATGAGATCTGATAAAGGGCCATGGCAAGACCCAAACATTCTGAAGGTGATTCTTAGTGGTGAAGTAACCTCTAGACAGATAGTAACAGTTTCAAATGACGAGGGAACGGTGATTGAATGTGAAAAGACGTGTTATCCATTGATACGGAGTAGTGATACATCTACAGGAGAATCAGGATCTGAAGTTGAAGACATTACTTCTCCCAAAGCAAGTGGGAATTATACAAACCCTAGGTTGACTCCTGTCCATGAAGAAGCAAGATTGGTTGGCAAAAATAGCCATGCTAGTGGTTTATCTGAGTATGATGAGTATGTTCCAATGGTTGACAAGACCGTTGATGTTGGATGGCAGGAGAAGCAAGCCAAAACTCAAAATACATTTGGCTCCAAAGAAAAGCTTACATTGATTACCACAAAATCTCCGGACGGAAGATTTTCATATATATGGGCTATTATAGTGGGCTTCTTGGTTTCCATCTTCGCGTTTGTTCATTCAATAGCATGTCATATAAAGGTAATAAAGGATTCTAAATCCATTGCTGCCCAAAATATGTCAAACATAGCAGCGGATTCACTACCCAAGGAGGAATCATGTCCCCCTTCACCCGTACTTGGATTCAGAAAGAACGAACTCGTCTCAGCTGCTTTGAGACGCCTTGGTGAGCTTGAAGAGAAGGTTGGCATGCTACAGTCAAAACCTAATGTGATGCCATGCGAGAAAGAGGAACTATTGAATGCCGCGGTCTATCGTGTGGACGCATTGGAAGCTGAACTGATTGCTACCAAAAAGGCGTTGTACGAAGCTTTGATAAGACAAGAAGAACTTCTAGCTTACATAGACAGACAAGAGAGAAGGAAATTTGAGAAAAAGAAGTTTTGCTGGTGA 1875 0.4256 MSGSLDRFARPCFEGFSGHDERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSSRRKSTGRTNSVSIEDVRDVKELQAVESFRQALMSDNLLPTRHDDYHMLLRFLKARKFDIEKAKHMWANMLQWRKDYGTDTIIEDFEFSELNEVLQYYPHGYHGVDKEGKPVYIERLGKVDPNKLMQVTTMERYLRYHVQGFEKTFALKFPACSIAAKRHIDSSTTILDVHGVGFKNLTKSARELIMRLQKIDGDYYPETLCRMFIINAGPGFKLLWNTIKSFIDPKTTSKINVLGNKFQNKLLEFIDASELPEFLGGICNCADQGGCMRSDKGPWQDPNILKVILSGEVTSRQIVTVSNDEGTVIECEKTCYPLIRSSDTSTGESGSEVEDITSPKASGNYTNPRLTPVHEEARLVGKNSHASGLSEYDEYVPMVDKTVDVGWQEKQAKTQNTFGSKEKLTLITTKSPDGRFSYIWAIIVGFLVSIFAFVHSIACHIKVIKDSKSIAAQNMSNIAADSLPKEESCPPSPVLGFRKNELVSAALRRLGELEEKVGMLQSKPNVMPCEKEELLNAAVYRVDALEAELIATKKALYEALIRQEELLAYIDRQERRKFEKKKFCW 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01594 624 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Arst6g01594 624 Pfam CRAL/TRIO domain 158 320 IPR001251 -
Arst6g01594 624 SUPERFAMILY CRAL/TRIO domain 152 345 IPR036865 -
Arst6g01594 624 Gene3D - 140 350 IPR036865 -
Arst6g01594 624 MobiDBLite consensus disorder prediction 49 67 - -
Arst6g01594 624 Pfam CRAL/TRIO, N-terminal domain 105 131 IPR011074 -
Arst6g01594 624 FunFam SEC14 cytosolic factor 140 352 - -
Arst6g01594 624 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Arst6g01594 624 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Arst6g01594 624 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Arst6g01594 624 MobiDBLite consensus disorder prediction 381 407 - -
Arst6g01594 624 MobiDBLite consensus disorder prediction 1 75 - -
Arst6g01594 624 SMART sec14_4 152 323 IPR001251 -
Arst6g01594 624 CDD SEC14 153 320 IPR001251 -
Arst6g01594 624 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 24 612 - -
Arst6g01594 624 SUPERFAMILY CRAL/TRIO N-terminal domain 83 148 IPR036273 -
Arst6g01594 624 MobiDBLite consensus disorder prediction 13 42 - -
Arst6g01594 624 Gene3D - 53 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01594 Arst-Chr6 16257397 16262978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01594 111 317 Acyl Lipid Metabolism Gene Families AT5G47730 29.665 1.13e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01594 K26544 - gmx:100812774 994.956