Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01581 ATGACAGGTTCAGGTACACCTTGTGGAGCCTGCAAATTCTTGAGGAGAAAATGCGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAACAAGGTGCTACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCCAAGCTCCTTGCTCATCTTCCTGTCGACCATCGCTGCGAAGCCGCCCTCACCATCTCATTCGAAGCTCAGGCAAGGCTTCAAGATCCAATCTATGGCTGCGTCGCACATATTTTTGCCCTACAACAACAGGTTATGAATTTACAAGCACAGTTGGCTTATTTAAGGGAACAAGCTGCACAGAGTTGTAATCTGAACCCTAATACTACTACTGCTCTTTACCCCCATCACCAAGATCTTGGAAATTCGTTCCAGATGGAGAATTCCACCATGGTTCCACACTTTCTTTCTAATAGTTCATCTAATTATCCCTCATCAGCAACACAACAATACCATGGGAATACTCGTAGTAGTCTCATGATGGAATCAAACCCTATTGAGAACTACGAAAATTCAAGCATCTCCTTTAATTCATATAGCTTTGATGAGACTTGTGACACGCTGTTCTTTGACATGAAAAGTGGATCAACTTCAATAAGTGGTCTTTGA 636 0.4277 MTGSGTPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVDHRCEAALTISFEAQARLQDPIYGCVAHIFALQQQVMNLQAQLAYLREQAAQSCNLNPNTTTALYPHHQDLGNSFQMENSTMVPHFLSNSSSNYPSSATQQYHGNTRSSLMMESNPIENYENSSISFNSYSFDETCDTLFFDMKSGSTSISGL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01581 211 Coils Coil 87 107 - -
Arst6g01581 211 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Arst6g01581 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 173 - -
Arst6g01581 211 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01581 Arst-Chr6 15967863 15969065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01581 7 192 AS2 family AT3G58190 55.612 7.00e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst6g01581 LOB 5.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01581 K13945 K13944 gmx:100816960 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01581 6 15967863 15969065 Arst6g01581 6 15967863 15969065 ECH