Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01580 ATGGCTTGTTCAAGTGGAAATGGAACAAGCAGTGGTGGATCAGGTTCACCGTGTGGGGCGTGCAAGTTTCTGAGGAGGAAGTGTGCTGCAGATTGCATATTTGCACCATACTTCTGCTCAGAACAAGGGCCTGCAAGATTTGCAGCCATACATAAGGTCTTTGGTGCAAGCAACGTTTCCAAGCTCTTGCTTCATATTCCCGCTCATGATCGCTGTGAGGCTGTTGTCACCATTGCTTATGAGGCTCAAGCTCGTATCAGAGACCCCGTTTATGGTTGCGTCTCTCACATTTTCGCATTACAACAACAGGTAGCATGCTTGCAGGCACAATTGATGCAAGTGAAGGCTCAGCTGGCACAGAATCAAATAGAGAATCAATGGGCAGGGAATGTTGGTGGAGCCATGAACAATCCATTTGGTCACACCAATTACATGAACCCTCCTATATCTCCTCAGAGTTCACTTGAATCAATTGATCATCACAGCAGCAGCATCATTGATATGCATGACACAAGACCAGAGGATTTCAACTCATTCCAACAACAACAACAACAACAACAACAAGCTTCTTCTAAGAGAAGATCATATAACAACAACAACAACAATGACCTGGGTGAGCTGCAAGAGTTGGCACTTAGGATGATGAGGAACTAA 654 0.4511 MACSSGNGTSSGGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNQIENQWAGNVGGAMNNPFGHTNYMNPPISPQSSLESIDHHSSSIIDMHDTRPEDFNSFQQQQQQQQQASSKRRSYNNNNNNDLGELQELALRMMRN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01580 217 MobiDBLite consensus disorder prediction 176 209 - -
Arst6g01580 217 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 210 - -
Arst6g01580 217 MobiDBLite consensus disorder prediction 176 206 - -
Arst6g01580 217 Coils Coil 97 124 - -
Arst6g01580 217 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Arst6g01580 217 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01580 Arst-Chr6 15941565 15943084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01580 4 217 AS2 family AT2G42430 54.508 6.52e-80 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst6g01580 LOB 8.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01580 K13944 - gmx:100801508 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01580 6 15941565 15943084 Arst6g01580 6 15941565 15943084 ECH