Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01576 ATGGAAGAAGAGGATACGGATCCATCGCCCCCGGGAACTGCTGGCAGATCGTATGAGTGTGTGTTCTGCAAGAGAGGCTTCACAACTGCACAAGCCTTAGGTGGACACATGAACATTCATAGAAAGGACAAGGCCAATAACAGAACCAAACCTACTACTACTTTTCTTATTCCTTCTTCAACTCAACTTCATCATTCCGATCATCATCTCGGCTTCTATTACTTTTCATCATCAACTTCCACACGGAATAACAACAACAACAACAACAATATCTATGAGGTTCATTCTGATTGTTCTTCTTCCAATCAAGGTTATTTTCCTCCACCCAAGGAGAGAAACTTGAGTTTTTGCAATAATAATAATAATCCATCATCATCATCATGTGTTGCTCAAGTTAAAGACAAGGTACAAGATAACAGTGATGAAGGTGGCGGCCTTGATTTAGAGCTCAGACTTGGTCATCATCATCCTTAA 474 0.4051 MEEEDTDPSPPGTAGRSYECVFCKRGFTTAQALGGHMNIHRKDKANNRTKPTTTFLIPSSTQLHHSDHHLGFYYFSSSTSTRNNNNNNNNIYEVHSDCSSSNQGYFPPPKERNLSFCNNNNNPSSSSCVAQVKDKVQDNSDEGGGLDLELRLGHHHP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01576 157 MobiDBLite consensus disorder prediction 135 157 - -
Arst6g01576 157 ProSitePatterns Zinc finger C2H2 type domain signature. 20 40 IPR013087 -
Arst6g01576 157 Gene3D Classic Zinc Finger 7 68 - -
Arst6g01576 157 Pfam C2H2-type zinc finger 18 42 - -
Arst6g01576 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 45 IPR013087 -
Arst6g01576 157 PANTHER OS07G0101800 PROTEIN 11 155 - -
Arst6g01576 157 SUPERFAMILY beta-beta-alpha zinc fingers 15 45 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01576 Arst-Chr6 15897921 15898730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01576 3 157 C2H2 Transcription Factor Family AT4G17810 29.121 3.43e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst6g01576 zf-C2H2_6 1.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01576 - - aip:107647878 258.84