Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01575 ATGGAAGGGAAGTATTATGTGGCAAGAAACAAGAAGAAGCATCAGAAAGAGGAGAAGAATAACAATAATAATACAAGGTTTGAAATGGAGGAGCAGCATCGTAGTAGTATTTGTTCATCATCATGGCCTGGGAGGAACTATGGGTGTAGCTTTTGCAAGAGAGAGTTCAAATCCGCACAAGCATTGGGTGGACACATGAATGTTCATAGAAGAGATAGGGCAAGATTGAGATCATCATCATCATCATCAATATGGCTTTCTTCCTCTTCTGATAAACCTAATAAACCTAACCCTAGCAGCATCCTGAAACCCAATACTAAGAACAACCCAATAATACCTTCCTCTTCATCTCTTTATTATAGCCCTAGTACCATTACTTTGTGCTCTTATTCTCCTTCAGCTTCCACAAGTAGCTGCGATAAGAAACCAAGACTCATCACATCACAGCTTCTTCCTCCCCCTCAAACGATCAGTAACAACACCACAGTCACAGCAAGGTGGAGTAGTAATTCTATAATGGAAGATGATGATGAGCACAACCACAACATCACCTTGGAATTGGGAATAGGGTTGCTTAAGCACCCAACTAACAACTTAGATTTGGAGCTTCGATTAGGCCAATGA 624 0.4087 MEGKYYVARNKKKHQKEEKNNNNNTRFEMEEQHRSSICSSSWPGRNYGCSFCKREFKSAQALGGHMNVHRRDRARLRSSSSSSIWLSSSSDKPNKPNPSSILKPNTKNNPIIPSSSSLYYSPSTITLCSYSPSASTSSCDKKPRLITSQLLPPPQTISNNTTVTARWSSNSIMEDDDEHNHNITLELGIGLLKHPTNNLDLELRLGQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01575 207 PANTHER OS07G0101800 PROTEIN 22 207 - -
Arst6g01575 207 MobiDBLite consensus disorder prediction 64 109 - -
Arst6g01575 207 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Arst6g01575 207 MobiDBLite consensus disorder prediction 1 29 - -
Arst6g01575 207 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Arst6g01575 207 MobiDBLite consensus disorder prediction 78 109 - -
Arst6g01575 207 Gene3D Classic Zinc Finger 39 97 - -
Arst6g01575 207 Pfam C2H2-type zinc finger 47 71 - -
Arst6g01575 207 SUPERFAMILY beta-beta-alpha zinc fingers 44 73 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01575 Arst-Chr6 15887164 15887787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01575 31 206 C2H2 Transcription Factor Family AT3G23130 38.710 8.69e-23 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst6g01575 zf-C2H2_6 8.3e-07 CL0361