Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01571 ATGGTTAAGGACGCGATTGTGACGTTGAAGGAGAAAAACGGTTCCAGTCAATACGCGATTCAGAAGTTCGTAGAAGAGAAGCAGAAGCAGCTACCTTCCAACTTCAGGAAGCTCTTGTTGTATCATTTGAAGAAGCTCGTTTCTTCTGGAAAGCTCGTTAAGGTCAAAGGCTCCTTCAAGCTTCCTCCGGTCAGGTCTGCAGCTCCCAAACCAGCTGCTGCTGCCCCCGCCAAGAAGAAGGCTGCAGCTGCTAAGCCCAAACCAAAGCCCAAGCCCAAAGCTAAGCCTGCTTCTAAGGCCAAGGACACCAAAACTACTAAGTCAGCAGCAGCCAAAGCACCTGCCAAGGCCAAGCCCGCTGCAAAGCCCAAGCCCAAGGCCAAGCCAGCTGCTAAACCCAAGGCGGTTGCTGCTAAGACCAAGGCAGCTCCGGCCAAGTCTAAGGCCAAGGCTAAGACGGCGCCAGCTGCAAAGCCGAAGGCAGCTGCGAAGCCTAAACCGGCTGCTAAGCCCAAGCCCAAGCCCAAAGAGAGGCCCTCCAAGGCTTCTAGAACGTCGACGAGAACTTCACCGGGGAAGAAAGCCCCTGCCGCTAAACCTGCGGCGAAGAAGGCAGCTCCCGCGAAGAAAGCCCCTTCAAAGGGTGCAAAGGCGAAGACCGTGAAATCTCCTGCGAAGAAGGCGACGACGGCGAGAAGGGGGAGAAAGTGA 711 0.5556 MVKDAIVTLKEKNGSSQYAIQKFVEEKQKQLPSNFRKLLLYHLKKLVSSGKLVKVKGSFKLPPVRSAAPKPAAAAPAKKKAAAAKPKPKPKPKAKPASKAKDTKTTKSAAAKAPAKAKPAAKPKPKAKPAAKPKAVAAKTKAAPAKSKAKAKTAPAAKPKAAAKPKPAAKPKPKPKERPSKASRTSTRTSPGKKAPAAKPAAKKAAPAKKAPSKGAKAKTVKSPAKKATTARRGRK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01571 236 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1 63 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst6g01571 236 Pfam linker histone H1 and H5 family 1 61 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst6g01571 236 CDD H15 1 63 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst6g01571 236 PANTHER HISTONE H1 1 210 - -
Arst6g01571 236 PRINTS Histone H5 signature 79 93 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst6g01571 236 PRINTS Histone H5 signature 131 150 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst6g01571 236 PRINTS Histone H5 signature 109 126 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst6g01571 236 PRINTS Histone H5 signature 8 25 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst6g01571 236 Gene3D - 1 67 IPR036388 -
Arst6g01571 236 SMART h15plus2 1 58 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst6g01571 236 SUPERFAMILY "Winged helix" DNA-binding domain 1 73 IPR036390 -
Arst6g01571 236 MobiDBLite consensus disorder prediction 59 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01571 Arst-Chr6 15767328 15768690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01571 1 89 Single Myb Histone (SMH) Gene Family AT1G49950 35.870 3.08e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01571 K11275 - pvy:116113303 107.457