Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01564 ATGGCGAATCGGGTGGTGAAGGTGAAGAGGGAGACGATTGCGGCATGCATGACTTGCCCCCTCTGCAACAAGCTCTTCAGAGAAGCCACCACCATATCCGAATGCCTTCACACGTTTTGCAGGAAGTGCATTTATGATAAAATCACAGATGAGGAATTAGAGTGCTGTCCAATATGCAACATTGACTTGGGTTGTGTTCCACTCGAAAAACTAAGGCCAGACCACAGTTTGCAAGATGTAAGGGCCAAAGTTTTCCCCTTAAAGGGAAGAAAGGTGACAAAGACACCTGAACCTGCTGCCCCCTCGGTACCATTACCAGCTAGAAGAAAGGAGAGATCTCTTTCATCTTTGGTGGTCAGCACTCCAAGGGTATCTGCACACGCAACCATGACAGGAAGAAGAACAAAACCTACAAGAAAGGCTGGTAGTCTGCGATCCTCTAGTTTTTCCATCGAAAAGTCCGTTAAAAAGGAGGAAGAAGTACTAGAAGATCATCCTGGGAGTTCAAGTTCACCGGACACTTCAAATAGGTTTGCTGAAGATACTCGACAGAGTTCATCCCCTCGTGAAGGCAGTCAACCCTTACCAAATAAAGGAACAGAGAATGGTGCCGAATCATGGGATGCAAAATTGGATCTTTGGAAACCCTTGAATTGTTTAGTAGAAGTTGCAAGTAGGAGCAAATCTTTCAAGTCTAATGCACAAGGGTCTGATGCTAAACCAGAAACCATTCAAGTAAATGAGACTGATTCTCAAGTGCTAAAAACCAAAAATAAGGAAAATAAACGCAAGGGGAAGACTGAGGATGAAAAGACTAGCAGTTGTCCTGTCTCTTCTGATACAGTGAAACCCAATAAATCGCGTAGAGTTCGGCGTAGAAAGGAACCCCCTTTTGGGGAATCAGGCATATTACCCCAAGCTGTGCTGGATTCTAACAGCAGTAAACACTTAAGGAGTTGTCCAATTTGGTTCTCCTTAGTAGCTTCTGAGAACCAGGAAGGAGACGCACCCTTGCCTCAAATTCCTTCAAGTTATGTGAGAATAAAGGATGGAAGCATACCTGTCTCATTTATCCAAAAATACTTAGTGAAGAAACTAGAGCTGACCAGTGAAGCAGAGATTGAGATTAAATGTATGGGGCAACCAGTGCTCCCTACACTGCGGCTACAAAATTTGGTTGAGTTGTGGCTGGATTCAGCCGCCACGTCACAGCGGATTCCAGCAACCATTGGGTCATCAGCAAAGGATTTTGTGATGGTCCTGGCCTATGCTCGGAAGGTCCCATATCCTTGA 1293 0.4501 MANRVVKVKRETIAACMTCPLCNKLFREATTISECLHTFCRKCIYDKITDEELECCPICNIDLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVTKTPEPAAPSVPLPARRKERSLSSLVVSTPRVSAHATMTGRRTKPTRKAGSLRSSSFSIEKSVKKEEEVLEDHPGSSSSPDTSNRFAEDTRQSSSPREGSQPLPNKGTENGAESWDAKLDLWKPLNCLVEVASRSKSFKSNAQGSDAKPETIQVNETDSQVLKTKNKENKRKGKTEDEKTSSCPVSSDTVKPNKSRRVRRRKEPPFGESGILPQAVLDSNSSKHLRSCPIWFSLVASENQEGDAPLPQIPSSYVRIKDGSIPVSFIQKYLVKKLELTSEAEIEIKCMGQPVLPTLRLQNLVELWLDSAATSQRIPATIGSSAKDFVMVLAYARKVPYP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01564 430 MobiDBLite consensus disorder prediction 229 252 - -
Arst6g01564 430 MobiDBLite consensus disorder prediction 229 301 - -
Arst6g01564 430 MobiDBLite consensus disorder prediction 89 204 - -
Arst6g01564 430 SMART ring_2 19 59 IPR001841 -
Arst6g01564 430 MobiDBLite consensus disorder prediction 151 166 - -
Arst6g01564 430 MobiDBLite consensus disorder prediction 167 200 - -
Arst6g01564 430 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 426 IPR044807 GO:0004842
Arst6g01564 430 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 103 IPR013083 -
Arst6g01564 430 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Arst6g01564 430 SUPERFAMILY RING/U-box 14 83 - -
Arst6g01564 430 CDD RING-HC_PCGF 17 60 - -
Arst6g01564 430 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Arst6g01564 430 MobiDBLite consensus disorder prediction 253 273 - -
Arst6g01564 430 MobiDBLite consensus disorder prediction 114 132 - -
Arst6g01564 430 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01564 Arst-Chr6 15671498 15677801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01564 2 349 C3H Transcription Factor Family AT2G30580 53.276 1.91e-109 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01564 K16277 - gmx:100793731 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01564 6 15671498 15677801 Arst6g01564 6 15671498 15677801 ECH
Arst6g01564 6 15671498 15677801 Arst6g01564 6 15671498 15677801 PCT