Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01552 ATGGACGTTTGTAATTCACACACAAACCGCGACACCACTATCGCGGATTATGTGCAGTTGGGCTTCGAACACCCATCATGGGTGCGCCACCAAAAGGAAATTTATCACCACGCCCTTGCTAATCATGAGGTGAGGTTTGCAGATAGGGTGCAAATCTGGAGAGATGCTCTCAAGGAAGCTGCCAACTTGTCTGGATTCCATTCACCGTCATCAAGCTTCAGGGATGATGCTGACCTTGTTGGTCAAATTGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAGTTTCGTTGTGCACGGAATCTGAAGATGTTATTATTGGCCTTTGGGGCATGGGTGGTGTTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAACAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGACAGAACTTCTTTCCAAACTGCTAAAGGAAGAAGATGCAAGTCCCTTTGTCACGCCTGGTGGAATAACTAATTTTGCCAAGAAAAGACTTGGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGACCAAATGGAAGATTTATGTGGAGGACATACACGGTTTGGGGCAAGTAGCAAAATCATAGCGACAACAAGAGATAAGCATGTCCTTCTTAGGGCGGACACTGATCATATTCATCAAGTTAAGACATTGAATTCTGATGATTCCCTTCAGCTTTTCAGCCTGAATGCCTTCAAGCAAAACTGCGCTATAGAAGCAGAACAAGTTGAGTTGTCCAAGAGAGTGCTTAACTATTGCAAAGGCCTTCCTTTAGCAATAAAAATCTTGGGTTCCTTCCTTAAAGGAAAAACTCAACAAGAGTGGGAAAGTGAACTGGCCAAACTTGAAAAGACGCCTGATGAAAAAATCCAAAGAATATTACGATTGAGTTATAATGAATTAGATCGTAATGATCGGAATATATTTTTGGAACTTGCATGTTTCTTTGATAGAAATACAGAAGAAGAAGAGCAGATAAAATCTCTTCTTGATCACTGTGGATACACAACTACTATCGGGTTGACAAATCTTTGTAATAAAGCTCTTATTTCCATTTCAAACGATTGTGTGTCAATGCATGACTTAATTCGAGAAATGGGCCGTGAAATTGTTCGCGGAGAATGTCTAGATGATCCAGGAAAACGCAGTAGACTATGGGATTCTTGTGATACCTATGAAGTACTGAAATACAATAAGGTAAGCAATTGA 1332 0.4024 MDVCNSHTNRDTTIADYVQLGFEHPSWVRHQKEIYHHALANHEVRFADRVQIWRDALKEAANLSGFHSPSSSFRDDADLVGQIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLVSLCTESEDVIIGLWGMGGVGKTTLATAVFNRLCDGFEGFCFLNNVRERAEKYGIDHLKTELLSKLLKEEDASPFVTPGGITNFAKKRLGRTKVLVVLDDVNDSDQMEDLCGGHTRFGASSKIIATTRDKHVLLRADTDHIHQVKTLNSDDSLQLFSLNAFKQNCAIEAEQVELSKRVLNYCKGLPLAIKILGSFLKGKTQQEWESELAKLEKTPDEKIQRILRLSYNELDRNDRNIFLELACFFDRNTEEEEQIKSLLDHCGYTTTIGLTNLCNKALISISNDCVSMHDLIREMGREIVRGECLDDPGKRSRLWDSCDTYEVLKYNKVSN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01552 443 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 436 IPR044974 GO:0006952
Arst6g01552 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 352 IPR027417 -
Arst6g01552 443 Gene3D - 19 96 IPR035897 -
Arst6g01552 443 SUPERFAMILY "Winged helix" DNA-binding domain 330 437 IPR036390 -
Arst6g01552 443 Pfam NB-ARC domain 110 343 IPR002182 GO:0043531
Arst6g01552 443 FunFam Disease resistance protein (TIR-NBS-LRR class) 260 343 - -
Arst6g01552 443 Gene3D - 339 410 IPR036388 -
Arst6g01552 443 Gene3D - 258 338 IPR042197 -
Arst6g01552 443 PRINTS Disease resistance protein signature 200 214 - -
Arst6g01552 443 PRINTS Disease resistance protein signature 294 308 - -
Arst6g01552 443 PRINTS Disease resistance protein signature 123 138 - -
Arst6g01552 443 Gene3D - 102 254 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01552 Arst-Chr6 15611442 15615257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01552 48 429 WRKY Transcription Factor Family AT4G12020 32.727 3.09e-54 193