Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01542 ATGGAAGCTTATTATGATGTTGTTGAGAATAACAAAGATATTGATGAAACTGAGAGCGATGATGATGATGATGATGATGATGAATCTCAGCATGAATTTGTTCAAGAACACTTCAAGAGAAAGAAGACTAACACAGTTAATGGGAGAAATGGGAATCCCAGTTTCAAGATTCGAATTCAAGAATCATATGTTGGGTCAAGTTGCGTGGCAATACCAGCAACGTTTGCAAGGAAGCATTTGGAGGAAGGACCGATTCGTATGAATGTGGGTAACAGAACTTGGACTGTGTGCTACAAAACTTGGAGAGGAAGTGACAGATATCGCAAACACAAATTGCAAAGTGGGTGGCTCAGATTTAGAAGAGAGAACAATTTAGAGGTTGGTGATGTGTGTGTCTTTGAGTTAATTAGCAAATTTCCTCAAACAATGACCATGAGATTGCAGAGTGGATGA 453 0.3907 MEAYYDVVENNKDIDETESDDDDDDDDESQHEFVQEHFKRKKTNTVNGRNGNPSFKIRIQESYVGSSCVAIPATFARKHLEEGPIRMNVGNRTWTVCYKTWRGSDRYRKHKLQSGWLRFRRENNLEVGDVCVFELISKFPQTMTMRLQSG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01542 150 SMART B3_2 55 149 IPR003340 GO:0003677
Arst6g01542 150 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 27 144 IPR044837 -
Arst6g01542 150 MobiDBLite consensus disorder prediction 1 32 - -
Arst6g01542 150 SUPERFAMILY DNA-binding pseudobarrel domain 50 143 IPR015300 -
Arst6g01542 150 MobiDBLite consensus disorder prediction 13 30 - -
Arst6g01542 150 ProSiteProfiles B3 DNA-binding domain profile. 54 150 IPR003340 GO:0003677
Arst6g01542 150 CDD B3_DNA 53 136 IPR003340 GO:0003677
Arst6g01542 150 Gene3D - 34 148 IPR015300 -
Arst6g01542 150 Pfam B3 DNA binding domain 56 143 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01542 Arst-Chr6 15535342 15536520 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01542 11 136 REM Transcription Factor Family AT1G49480 32.394 5.36e-17 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst6g01542 B3 1.4e-15 CL0405