Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01535 ATGGCCAACAACCCTTCCGACCCTCCCGCCGACGACTTCCTCGAACAAATACTCGGCCTTCCAACCTTCGCTTCCGCCGACCACTCCCTCGCCGGACCCGATGTTTCCGCCCTCGCGCCGGGTGCCGCCGCTCCCATGATGCTTCAGCTCAACTCCGGCGATGCTGGCCCTCATCCCCTCGCCGGCGGAGGGGGCTTCCACGCTCCCATGTACCAGCTAGGTCTCAGCTTGGACCAAGGGAAAGGAGCCGATGGAGCAGCAGCAGCAGGAGTAGGCTTCTTGAAGCCACCGGAAGAGGCCTCCGGTAGCGGCAAGCGCTTTCGCGACGACGTCCTTGATGCCAGAGCTAAGAATGTTTTTCATGGCCAACCAATGCCTACTACTATTCCGGCAGCTCCACATCCTCCAACAATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGACCCGCACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAAAGAATCAGGGCTCTGCAAGAACTGGTTCCAAGTGTCAACAAGACGGATAGAGCTGCAATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTAAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCACCACTGGTAACTGACATCCCATTATCATCAGTTGAGGAGGAAGGCGGTGATGGTGGAAGAAACCGGCCGGCTTGGGACAAGTGGTCAAATGATGGCACAGAAAGACAGGTGGCTAAGCTTATGGAAGAAAACGTTGGAGCAGCCATGCAGTTTCTTCAATCCAAGGCACTCTGCATCATGCCAATCTCACTTGCATCCGCGATATACCAATCACAACCCCCGGACACCTCTAGTATAGTGAAGCCTGAAGCTAACCCTCCTCCATAG 915 0.5475 MANNPSDPPADDFLEQILGLPTFASADHSLAGPDVSALAPGAAAPMMLQLNSGDAGPHPLAGGGGFHAPMYQLGLSLDQGKGADGAAAAGVGFLKPPEEASGSGKRFRDDVLDARAKNVFHGQPMPTTIPAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGDGGRNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPEANPPP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01535 304 Pfam Helix-loop-helix DNA-binding domain 153 197 IPR011598 GO:0046983
Arst6g01535 304 MobiDBLite consensus disorder prediction 122 152 - -
Arst6g01535 304 SMART finulus 154 203 IPR011598 GO:0046983
Arst6g01535 304 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 101 283 - -
Arst6g01535 304 MobiDBLite consensus disorder prediction 226 245 - -
Arst6g01535 304 Gene3D - 143 205 IPR036638 GO:0046983
Arst6g01535 304 FunFam Basic helix-loop-helix transcription factor 143 205 - -
Arst6g01535 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Arst6g01535 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 207 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01535 Arst-Chr6 15290789 15294571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01535 66 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.098 1.40e-118 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst6g01535 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01535 - - ccaj:109808880 470.314