Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01523 ATGGTGATGGGTTTGGAAAAGGATCCTCGTGTGTTTTTAGATGTCTCAATTGGCGGGGACCCTGTGGAAAGAATTGTAATACAGCTTTTTGCTGGTGTTGTTCCCAAGACAGCTGAGAATTTTCGGGCACTCTGTACAGGGGAGAAGGGCATTGGGGCATCCACGGCGAAACCTTTGCATTATAAAGGGACAAGTTTTCATCGAATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAATTTGCAGATGAAAATTTCAAACTATCACATGATGGACCTGGTGTTCTTTCCATGGCTAATAGTGGAGCTAACACAAATGGGTCTCAGTTCTTTATTACCTTTAAGCGGCAACCACATCTTGATGGTAAACACGTTGTTTTTGGGAAAGTTGTCATGGGAATGGACATCCTGAAGAAAATTGAGCTGGTGGGATCTTCTGATGGGAAACCTGTTCAGCCTGTCAAAATTATTGATTGTGGTGAAGTTTCAGAGACAAAAGTCCAGCATGCTGTTGAGAAGGACAAAGGGAAAAAGAGAAAATCAGGGAAATCTGTATCTCCTGATGATGGTTCTGCCAAAAGATCAAGGGGTAGAAGGAAAAAAACTTCAAAAGATACTAAGAGAAGGAAGAAGAGATACTCAACATCAGATAGTGATGGTAGTGGCAGTGACATGGATAAGCGCAAGCATGAGAAGAAGAGGAGAAAGGGACAAAAGCATAGAAGGCGCCAGCACACTAGAAGTAGAAGATCAAGACACAAGTCCAAATGGAGTTCAGAGGATTCAAGTGATACAGAAAGTGAAAGTTCTAGTGCTAGTGGCAGTAGTTCTGGCAAGGAAAAGGCTGATCGTCGTGGCTCTAGATCTAAAGCACTTGCTGACAATAAACCACAAAGGAATTTAGACACAGGAAAGCAATCTTCTAGTCCCCCTATAAAAAGTAAAAGTATTTCAGAACAAGGGATGGATACTAAGGCTAGAAGAACTGTGGACAAGGAATCACATGAAGAAGGTGAACTGTCTCCGGAAAATGATGAACTTCTGAATAATGGGCATGATACTCGGGCCAAACTTAGTAAACCTTCTAAGCAACAGACCTATTCAGATGATTCAGATCAGAATAGAGGTGCAAGTCCTGGAAGAGGTCCTGCTGGGAAGTCTGGGGAGCTAAACCAGGGACACAGTGTATTGGCTAGTCCTGGTCAAAAAGCATCTGAACCAGCATCTAAAACCCAGGGCTTTTCGAAAAGTCCTTCACCACATGGTATGCCTAAGCGTATAAAAAAAGGACGTGGCTTTACAGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCTGAACGTTCTCCCCCTGCATATCGTTATGGCGATAGAAATATTAGAAGGAACTTTGACAGAAACTCAAGCTACAGAAGATATTCTGAGCGCTCCCCTCCAAGACGTTTCCGGAGCCCACCAAGGGGTGGAAACCGTCCAAGATACCAAAATAGAAGAAGTCGAAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGCCGTTTTAGAGACCATGGTCGCAGCCAGAGTCCAGTACGTAGTCCTAGTCCTGAAGACAGGAGGCCTCCAATAAGTGACAGATTGAAATCCCGACTTGGTCCTCGTAATGATCTACCCTCTCCGGACAAAGGCAGGTCAAGGTCCAATTCCAGGAGTAACAGATCTTCTAGTTCCAGATCACCTGATGCGACGCCACCAAAACGACGACATGATAAAAGGACATCATCTCGAAGCAGGTCTAGATCAAGCTCATTGTCTGGACAAAAGGGGTTAGTTTCTTATGGAGATGCAAGTCCTGATTCTGGGGCAACGTAG 1899 0.445 MVMGLEKDPRVFLDVSIGGDPVERIVIQLFAGVVPKTAENFRALCTGEKGIGASTAKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLSHDGPGVLSMANSGANTNGSQFFITFKRQPHLDGKHVVFGKVVMGMDILKKIELVGSSDGKPVQPVKIIDCGEVSETKVQHAVEKDKGKKRKSGKSVSPDDGSAKRSRGRRKKTSKDTKRRKKRYSTSDSDGSGSDSXDKRKHEKKRRKGQKHRRRQHTRSRRSRHKSKWSSEDSSDTESESSSASGSSSGKEKADRRGSRSKALADNKPQRNLDTGKQSSSPPIKSKSISEQGMDTKARRTVDKESHEEGELSPENDELLNNGHDTRAKLSKPSKQQTYSDDSDQNRGASPGRGPAGKSGELNQGHSVLASPGQKASEPASKTQGFSKSPSPHGMPKRIKKGRGFTERYAFARRYRTPSPERSPPAYRYGDRNIRRNFDRNSSYRRYSERSPPRRFRSPPRGGNRPRYQNRRSRSRSISRSPVRGRFRDHGRSQSPVRSPSPEDRRPPISDRLKSRLGPRNDLPSPDKGRSRSNSRSNRSSSSRSPDATPPKRRHDKRTSSRSRSRSSSLSGQKGLVSYGDASPDSGAT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01523 633 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 61 78 IPR020892 GO:0003755|GO:0006457
Arst6g01523 633 MobiDBLite consensus disorder prediction 336 375 - -
Arst6g01523 633 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 10 177 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 294 308 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 511 525 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 408 434 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 225 244 - -
Arst6g01523 633 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 12 176 IPR002130 GO:0000413|GO:0003755
Arst6g01523 633 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 175 IPR002130 GO:0000413|GO:0003755
Arst6g01523 633 MobiDBLite consensus disorder prediction 245 269 - -
Arst6g01523 633 CDD cyclophilin_ABH_like 9 175 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 548 578 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 182 633 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 472 500 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 309 335 - -
Arst6g01523 633 MobiDBLite consensus disorder prediction 182 210 - -
Arst6g01523 633 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 3 184 - -
Arst6g01523 633 SUPERFAMILY Cyclophilin-like 8 177 IPR029000 -
Arst6g01523 633 Gene3D - 3 184 IPR029000 -
Arst6g01523 633 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 IPR002130 GO:0000413|GO:0003755
Arst6g01523 633 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 136 IPR002130 GO:0000413|GO:0003755
Arst6g01523 633 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 78 IPR002130 GO:0000413|GO:0003755
Arst6g01523 633 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 IPR002130 GO:0000413|GO:0003755
Arst6g01523 633 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 29 44 IPR002130 GO:0000413|GO:0003755
Arst6g01523 633 MobiDBLite consensus disorder prediction 376 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01523 Arst-Chr6 15169707 15174880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01523 27 173 U-box Gene Family AT5G67530 47.651 7.71e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01523 K09566 - gmx:100807327 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01523 6 15169707 15174880 Arst6g01523 6 15169707 15174880 ECH