Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01500 ATGTCGAGCTCCAGCAGCCATAATCTAAATGCTACTCCACTCATCGTTGACATCGCCAACACCTTTACCAGACTCACTTCTCCCCCATTAACCTCACCAAAACAACGCTGGCGTTTCGCTTATACCAAAATCTATTCTGGAAGAGTCTTTGTGTCCCTTGCGAAAGAGATCGTCTCCAAAAGAAATCACAATCAATTCCTTCTTCGTGATGATATAATAGAGCCTCTAGTTCACTGCAACAATTCCTTCCTGGCTGTTCCTCATGATGCTGATAAATCCAAGCTTGTTAACATGGTTAAGGACAAAAGCTTGGACTCTCTTGCTTCCTTTGGAGGCGTGGAGGCTGTAGCTTATGTCATTGGAACTGTTCCATCGAAGGGAATTGACGACAAAGAAGAAGAAATTGCCAAGCGTCGCGATATCTTTGGCTCCAACACTTACCCTCGTCCGCCGCCAAAAGGACTCCTCCACTTTGTTCTTGAAGCCTTCAATGACACCACAATAATCATCCTTCTTGTTTGCGCCGGCCTTTCACTCGGCTTTGGAATCAAACAGCACGGTGCAGGGGAAGGTTGGTATGAAGGTGGAAGCATATTCGTGGCGGTGTTGTTGGTGGTTGTTGTAAGCTCAGTCAGCAACTTGAGGCAGGAGAGGCAGTTTCACAAGCTGTCCAAGATTAGCAGTGACATCAAGGTTGATGTTGTGAGGAATGGAAGGCCGCAACAGATTTCGATTTTCGACGTTCTTGTGGGAGATATCGTTTCACTCAAGATTGGGGATCAAGTTCCCGCTGATGGATTGTTCATATCTGGTCATGCTCTTCATGTTGATGAATCAAGCATGACAGGGGAGAGTGATCATGTCGAAATTGAGCCGTTAAATAGTCCTTTCTTGTTGTCCGGCGCCAAAGTGGTCGACGGTTATGCAACAATGATGGTGACGTCCGTCGGAACTAACACGGCGTGGGGACAGTTGATGAGCACGGTATCAAGAGGTGACACGGAGGAGAGGACGCCGTTGCAGGCGCGTCTCGATAGCTTGACTACATCGATAGGAAAAGTAGGCCTCTCGGTTGCACTCCTTGTGTTTGTGGTAATGCTTATTCGTTATTTTACTGGAAACACCAGCAGTGAAGACGGTTATACAGAGTTCAAGAAAGGTAGTACTGATTTGAGTGATGTGTTCAATGCTGTTGTGAAGATAATTGCGGTTGCAGTCACCATTGTGGTCGTGGCGATCCCTGAAGGATTGCCATTGGCTGTCACTCTCACCTTGGCTTATTCCATGAAGAGAATGATGGCAGATCAGGCTATGGTGAGGAAACTCTCTGCTTGCGAAACTATGGGGTCGGCAACGGTTATATGCACTGATAAAACTGGGACTCTGACTCTCAATGAGATGAGAGTGAACAAGTTCTGGTTAGGCCTTGAAAACATCATTGAGAATTATTCCAATGCAATGGCCAAGAGAGTTGTGGAATTGTTCCACCAGGGAATAGGCCTCAATACAACTGGCAGTGTATATAAGCCTTTGCCGGAATCCGGGCCTGAAATCTCTGGTAGCCCTACAGAGAAAGCTATTCTCTTGTGGGCTGTGTCAGATTTAAGCATGGACATGGATGGACTAAAGCAGAAACATGAGATCATCCATGTTGAAACGTTTAACTCGGAGAAGAAACGAAGCGGGGTAGCAGTAAGGAAGAAGAGTGACAATACAGTACATGTACATTGGAAAGGTGCTGCTGAGATGATACTTGCAATGTGTTCTAACTACATTGATTGTAATGGCACAGAGAAGTCCCTTGGTGAAAAAGAACGGGATGAAATTGAGAAAATAATTCAGGGAATGGCAGCTAGTAGCCTAAGATGCATTGCTTTTGCTCACATTGAAATCGACTACAGCGATGATAAGGTACTAAGAGAAGATGGCTTGACCTTGCTAGGAATCGTCGGCCTTAAGGATCCATGCCGGCCGGAAGTCAAGAAGGCTGTGGAAACTTGCAAGTATGCAGGTGTTGATATCAAGATGATCACCGGAGATAACTTATTCACGGCAAAGGCAATAGCAACAGAATGTGGAATACTAGACCTTAGTGATGATGTAGCCAAGGGACAAGTGGTGGAAGGTGAGGAATTTCGGAACTACACGGAGGAAGAGAGAATGGAGAAAGTAGATGATATTCGAGTGATGGCGAGATCTTCTCCTTTGGACAAACATTTGATGGTGCAATGCTTAAGAAAGAAAGGCCATGTAGTTGCAGTCACAGGAGATGGCACCAACGATGCGCCTGCGCTAAAAGAAGCTGATATTGGACTTTCTATGGGAATCCAAGGCACTGAAGTTGCCAAGGAAAGTTCTGACATTGTTATCTTGGATGACAACTTCAATTCTGTTGCAACGGTTTTAAGGTGGGGAAGATGTGTATATAACAATATACAGAAATTTATCCAATTTCAACTAACAGTGAATGTTGCAGCACTTGTGATAAATTTTATAGCTGCAGTTTCTGCTGGTGATGTTCCCTTAACAACAGTTCAACTTCTATGGGTTAATCTCATTATGGATACTCTAGGTGCTCTGGCCCTGGCCACGGAACGGCCTACAAAGGAGTTAATGGAGAAACGGCCGGTGGGGCGTACCGAGCCGCTTATCACTAACATTATGTGGAGAAACCTTTTACCTCAAGCTTTGTATCAGATTGCAGTCTTATTGGTTTTCCAATTCAAAGGGAAGGCAATATTCAATGTAGATGAGAAGGTAAAGAACACACTAATTTTTAATACTTTTGTTCTGTGCCAAGTTTTCAACGAGTTCAACTCTAGGAGTATGGAGAAACAAAATGTGTTCAGAGGCATTCACAAAAACCACTTGTTCCTTGGAATTGTTGGGATTACAATTGTTCTTCAAATTGCAATGGTGGAATTCCTGAGGAAGTTTGCTGATACAGAGAGACTAACATGGATTCAATGGGGATATTGTGTTTTATTTGCAGCTTTTTCATGGCCACTGGCTTGGTTTGTAAAGTTCATTCCTGTTTCAGATAAGCCATTTTTCAGTTTCAAGATTAAGCGGTCTTTTTAG 3081 0.4411 MSSSSSHNLNATPLIVDIANTFTRLTSPPLTSPKQRWRFAYTKIYSGRVFVSLAKEIVSKRNHNQFLLRDDIIEPLVHCNNSFLAVPHDADKSKLVNMVKDKSLDSLASFGGVEAVAYVIGTVPSKGIDDKEEEIAKRRDIFGSNTYPRPPPKGLLHFVLEAFNDTTIIILLVCAGLSLGFGIKQHGAGEGWYEGGSIFVAVLLVVVVSSVSNLRQERQFHKLSKISSDIKVDVVRNGRPQQISIFDVLVGDIVSLKIGDQVPADGLFISGHALHVDESSMTGESDHVEIEPLNSPFLLSGAKVVDGYATMMVTSVGTNTAWGQLMSTVSRGDTEERTPLQARLDSLTTSIGKVGLSVALLVFVVMLIRYFTGNTSSEDGYTEFKKGSTDLSDVFNAVVKIIAVAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNEMRVNKFWLGLENIIENYSNAMAKRVVELFHQGIGLNTTGSVYKPLPESGPEISGSPTEKAILLWAVSDLSMDMDGLKQKHEIIHVETFNSEKKRSGVAVRKKSDNTVHVHWKGAAEMILAMCSNYIDCNGTEKSLGEKERDEIEKIIQGMAASSLRCIAFAHIEIDYSDDKVLREDGLTLLGIVGLKDPCRPEVKKAVETCKYAGVDIKMITGDNLFTAKAIATECGILDLSDDVAKGQVVEGEEFRNYTEEERMEKVDDIRVMARSSPLDKHLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSAGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMEKRPVGRTEPLITNIMWRNLLPQALYQIAVLLVFQFKGKAIFNVDEKVKNTLIFNTFVLCQVFNEFNSRSMEKQNVFRGIHKNHLFLGIVGITIVLQIAMVEFLRKFADTERLTWIQWGYCVLFAAFSWPLAWFVKFIPVSDKPFFSFKIKRSF 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01500 1026 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Arst6g01500 1026 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst6g01500 1026 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst6g01500 1026 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst6g01500 1026 Gene3D - 465 655 IPR023299 GO:0000166
Arst6g01500 1026 Gene3D - 132 330 - -
Arst6g01500 1026 SUPERFAMILY Calcium ATPase, transduction domain A 231 329 IPR008250 -
Arst6g01500 1026 SMART Cation_ATPase_N_a_2 109 183 IPR004014 -
Arst6g01500 1026 Gene3D - 452 800 IPR023214 -
Arst6g01500 1026 Pfam Cation transporting ATPase, C-terminus 840 1010 IPR006068 -
Arst6g01500 1026 NCBIfam HAD-IC family P-type ATPase 198 373 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst6g01500 1026 NCBIfam HAD-IC family P-type ATPase 396 491 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst6g01500 1026 NCBIfam HAD-IC family P-type ATPase 726 835 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst6g01500 1026 SUPERFAMILY Calcium ATPase, transmembrane domain M 111 1012 IPR023298 -
Arst6g01500 1026 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 660 IPR023299 GO:0000166
Arst6g01500 1026 NCBIfam calcium-translocating P-type ATPase, PMCA-type 98 1012 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst6g01500 1026 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Arst6g01500 1026 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Arst6g01500 1026 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Arst6g01500 1026 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Arst6g01500 1026 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Arst6g01500 1026 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Arst6g01500 1026 FunFam Calcium-transporting ATPase 772 1014 - -
Arst6g01500 1026 Pfam E1-E2 ATPase 230 433 - -
Arst6g01500 1026 Pfam Cation transporter/ATPase, N-terminus 111 178 IPR004014 -
Arst6g01500 1026 SFLD C1.7: P-type atpase like 437 808 - -
Arst6g01500 1026 SFLD C1.7: P-type atpase like 437 808 - -
Arst6g01500 1026 PANTHER CATION TRANSPORTING ATPASE 87 1013 - -
Arst6g01500 1026 PANTHER CATION TRANSPORTING ATPASE 87 1013 - -
Arst6g01500 1026 CDD P-type_ATPase_Ca_PMCA-like 135 888 - -
Arst6g01500 1026 FunFam Calcium-transporting ATPase 208 330 - -
Arst6g01500 1026 FunFam Calcium-transporting ATPase 465 655 - -
Arst6g01500 1026 Gene3D - 161 1009 - -
Arst6g01500 1026 FunFam Calcium-transporting ATPase 650 800 - -
Arst6g01500 1026 Pfam haloacid dehalogenase-like hydrolase 453 769 - -
Arst6g01500 1026 SUPERFAMILY HAD-like 453 860 IPR036412 -
Arst6g01500 1026 SFLD p-type atpase 437 808 IPR044492 -
Arst6g01500 1026 SFLD p-type atpase 437 808 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01500 Arst-Chr6 15134082 15137696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01500 34 1026 Primary Pumps ATPases AT3G63380 68.831 0.0 1335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01500 K01537 - gmx:100790034 1542.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01500 6 15134082 15137696 Arst6g01500 6 15134082 15137696 ECH