Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01494 ATGAACTATCTGTATCCGGTGAAGGAAGAGTACCAGGAGGAAGCATCGTCGTCGTCGTACTTTGTGGCTGGAAATGACGAGACGAGGATGGTTCCTCCGCCGCAGCCAATGGAGGGGCTCCACGAAGCGGGGCCACCACCATTCCTGACGAAGACGTTCGACGCGGTGGACGATCCGGCCACAGACCACGTAGTGTCGTGGAGCCGAAGCGGAGCAAGCTTCGTGGTTTGGGATCCGCACGCCTTCTCCAGAGGCCTTCTTCCAAGATACTTCAAGCATAACAACTTCTCCAGCTTCGTAAGGCAGCTCAACACTTACGGTTTTAGAAAGATTGATCCAGATAAATGGGAATTTGCGAATGAAGGGTTTGTGAGAGGGCACAGGCACCTGTTGACAAGTATAAGGAGAAGGAAGGCGCCTCCGCCACCAATCCAAACGCAGACTTCGCAGTCGCAGCAGGGTCACTGCCTTGAAGTAGGGCGATTCGGATTGGATGAAGAGATCGACCGGTTGAGGCGTGACAAGCAGGTTTTGATGATTGAGCTTGTGAGGCTAAGACAGCAGCAACAAACCACAAGATCGTATCTTCAGGCAATGGAGCAGAGGCTGAAAGGTACTGAGATCAAGCAGCAGCAGATGATGGCTTTCTTGGCCAAAGCAATGAAGAACCCCGTGTTTATACAGCAACTCATACAGCACAAGGAGAAAAGGAAGGAGCTTGAGGATGCCATGACCAAGAAGAGGAGGAGGCCCATTGAGCAAGGGCCTAGTTGCAGCACCACTACTGTTAAGGTTGAGAATCCACCAGAGTTTGCTGGTTATGCTGGTGGCTTTGGAGCTTCTGAGCTTCAAATTCTGGCTATGGAGATGCAAGGATATGGTAGAGGGAGGCGAGAGAGTACTGAACATGAGCATGAGCAAGAGCAAGAGCAAGAGCAAGAGAGGCTTGACAAGGAGCTTGATGACGAAGGCTTCTGGGAAGAGCTGTTCAGTGAGAATTTTGAGGGTGATTTGGACATTTCACAAGATGAAGAAGAGGATGTTAATGTGTTGGCCAATCGGCTGGGTTACTTGGGTTCAAGTCCTAAGTGA 1092 0.5082 MNYLYPVKEEYQEEASSSSYFVAGNDETRMVPPPQPMEGLHEAGPPPFLTKTFDAVDDPATDHVVSWSRSGASFVVWDPHAFSRGLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFVRGHRHLLTSIRRRKAPPPPIQTQTSQSQQGHCLEVGRFGLDEEIDRLRRDKQVLMIELVRLRQQQQTTRSYLQAMEQRLKGTEIKQQQMMAFLAKAMKNPVFIQQLIQHKEKRKELEDAMTKKRRRPIEQGPSCSTTTVKVENPPEFAGYAGGFGASELQILAMEMQGYGRGRRESTEHEHEQEQEQEQERLDKELDDEGFWEELFSENFEGDLDISQDEEEDVNVLANRLGYLGSSPK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01494 363 FunFam Heat shock transcription factor 1 41 138 - -
Arst6g01494 363 Coils Coil 302 322 - -
Arst6g01494 363 Pfam HSF-type DNA-binding 48 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01494 363 Gene3D - 40 138 IPR036388 -
Arst6g01494 363 Coils Coil 230 250 - -
Arst6g01494 363 MobiDBLite consensus disorder prediction 295 322 - -
Arst6g01494 363 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 34 297 IPR027725 -
Arst6g01494 363 SUPERFAMILY "Winged helix" DNA-binding domain 44 137 IPR036390 -
Arst6g01494 363 MobiDBLite consensus disorder prediction 293 322 - -
Arst6g01494 363 Coils Coil 168 188 - -
Arst6g01494 363 ProSitePatterns HSF-type DNA-binding domain signature. 87 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01494 363 SMART hsfneu3 44 137 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01494 363 MobiDBLite consensus disorder prediction 243 264 - -
Arst6g01494 363 PRINTS Heat shock factor (HSF) domain signature 48 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01494 363 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01494 363 PRINTS Heat shock factor (HSF) domain signature 99 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01494 Arst-Chr6 15091197 15093559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01494 22 361 HSF AT3G22830 53.209 2.70e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Arst6g01494 HSF_DNA-bind 2.2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01494 K09419 - gmx:100794264 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01494 6 15091197 15093559 Arst6g01494 6 15091197 15093559 PCT