Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01422 ATGAGCTACCACGCGAATAGTGAAGAGGGCCGAAGAGGTTGGAAAAGGAAGCCCCCGGGAATGGAACGTTGGGGGAGAGAACAGAGGCCGTACGATACAAACTCTAGACCTTACGATAGGAACATGGTTCCTCATGGTTGGTTAGGCTGCCCACCACATGGTCAAGAATTAGGATTCATAATACCATCAAAGGTCCCACTCGGTGAATCCTTCAACGATAACATCCTAGGTCAGAAATATACTCCCAAGCAAGCAATTCTTCAGCAACGAGCTTTAGGTAGAGAACTTGGTTTAGTGCTTGATCTGACAAATACTAACCGTTACTATCCAGTTTCAGATTGGACAAAAGAAGGGATTAGTCATGTTAAGATAAGATGCAAGGGAAGAGATTCTGTGCCTGATGATGAATCTGTAAAAAAATTTTGTGACGAGGTTCTGGACTTTTGCTCCCGAAGAACAAATACAAAGAAATATATACTAGTACATTGCACACATGGGCATAACCGTACAGGTTATATGATTGTTCATTTTCTTGTGCGCACAGAATCCATTTCTGTGACTGAGGCAATAAATAGATTTGCTCAGGCTCGTTACCCAGGAATTTACAAGCAGGATTACATTGACGCCCTATATATGTTTTATCGTGAAAAGAAGCCTGAAGATCTTGTTTGTCCTCAGACTCCAGAATGGAAAAGACTTTGTGAGACAGATTTTGATGGTGCTGCTGTCCCAGCTGTAGACAACTATAGAGATGTGCCTCAGCAGGATGCTGTAGAAAATTATGGAAATGTTCCTCAGCAGGTGCATGCTGTAGAAAATCATGGAAATGTTCCTCAGCAGGAGAATACCATGAGGAATGAAGCATTGACTAATGACGATATTTTGGGAGATTCCATTCCTTCATATCAGCTGCATACAATGCAAGAAGTTTGTTATCAACTGCTCAAACTGGGCACAGGGGGGAGAGGACGTCCGCAGTTTCCTGGATCACACCCCGTTTCTTTGAACAGTGAAAATCTACAACTCTTAAGACAGCGGTATTACTATGCCACTTGGAAAGCTGATGGAACTCGTTACATGATGCTGATTACTTTTGATGGATGTTATCTGATCGACAGAAAGTTTCTCTTCCGAAAGATCAACATGCGGTTTCCTTGCAGATACTCAAATGGGGGTACACCTGAGAAGAATCACCACTATACATTACTTGACGGGGAGATGATTATCGACATGGATCCGCATACGCATAAGCAAGAGAGAAGATACCTCATTTATGATCTGATGGCAATTAATCAAGTCTCAGTGACAGAGCTTCCATTCTACGAACGGTGGAAATTGCTGGAGAAAGAAGTAATTGAGCCTCGTAACATGGAACGAGAGGCTCTTTCCAAGAGTACAAATCCTTATTACAGATATGACTTGGAGCCATTTAGCGTGAGGAGGAAGGGGTTTTGGTTACTTTCTACCGTTTCAAAGCTCCTTCATAAATTTATTCCACAACTCTCGCATCAATCAGATGGTCTGGTGTTCCAGGGTTGGGATGATCCATATGTCCCTCGCACACACGAAGGTCTTTTGAAGTGGAAATATCCCGAGATGAACTCTGTTGACTTCCTCTGTGAGGTTGGAGCAGGTGATCGCCCCCTCCTTTATCTGTTTGAACGCGGAAGGAAGAAGTTAATGGAAGGGAATAGAGTTATTTTTAAAGATGCATCAGATATTTCTTCCTATTCAGGGAAGATCATTGAGTGCTACTGGGACGCCACAGAGCGTCACTGGGTCTGTATGAGAATCAGATTTGACAAAGCAAATCCGAATGAGATTAATACCTACAGAAAGGTAATGCGAAGCATAAAGGATAACATTACCGAAGAGTTGCTGTTGAATGAGATCAATGGAATCATTAGCCTACCCTTATATGCAGACAGAATACAAAGGGATATCAAGGCTCACCAGAACACCGTCTTGTTGCGGCGCAGATAA 1983 0.4276 MSYHANSEEGRRGWKRKPPGMERWGREQRPYDTNSRPYDRNMVPHGWLGCPPHGQELGFIIPSKVPLGESFNDNILGQKYTPKQAILQQRALGRELGLVLDLTNTNRYYPVSDWTKEGISHVKIRCKGRDSVPDDESVKKFCDEVLDFCSRRTNTKKYILVHCTHGHNRTGYMIVHFLVRTESISVTEAINRFAQARYPGIYKQDYIDALYMFYREKKPEDLVCPQTPEWKRLCETDFDGAAVPAVDNYRDVPQQDAVENYGNVPQQVHAVENHGNVPQQENTMRNEALTNDDILGDSIPSYQLHTMQEVCYQLLKLGTGGRGRPQFPGSHPVSLNSENLQLLRQRYYYATWKADGTRYMMLITFDGCYLIDRKFLFRKINMRFPCRYSNGGTPEKNHHYTLLDGEMIIDMDPHTHKQERRYLIYDLMAINQVSVTELPFYERWKLLEKEVIEPRNMEREALSKSTNPYYRYDLEPFSVRRKGFWLLSTVSKLLHKFIPQLSHQSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLCEVGAGDRPLLYLFERGRKKLMEGNRVIFKDASDISSYSGKIIECYWDATERHWVCMRIRFDKANPNEINTYRKVMRSIKDNITEELLLNEINGIISLPLYADRIQRDIKAHQNTVLLRRR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01422 660 CDD RNA_5'-triphosphatase 46 212 - -
Arst6g01422 660 Pfam mRNA capping enzyme, C-terminal domain 560 627 IPR013846 -
Arst6g01422 660 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 293 530 - -
Arst6g01422 660 FunFam mRNA capping enzyme family protein 39 252 - -
Arst6g01422 660 FunFam mRNA capping enzyme family protein 528 637 - -
Arst6g01422 660 PIRSF mRNA_capping_HCE 30 660 IPR017074 GO:0004484|GO:0006370|GO:0140818
Arst6g01422 660 ProSitePatterns Tyrosine specific protein phosphatases active site. 161 171 IPR016130 GO:0016311|GO:0016791
Arst6g01422 660 Gene3D DNA ligase/mRNA capping enzyme 290 527 - -
Arst6g01422 660 ProSiteProfiles Dual specificity protein phosphatase domain profile. 65 220 IPR020422 GO:0006470|GO:0008138
Arst6g01422 660 Gene3D Protein tyrosine phosphatase superfamily 20 237 IPR029021 -
Arst6g01422 660 Pfam mRNA capping enzyme, catalytic domain 331 529 IPR001339 GO:0004484|GO:0005524|GO:0006370
Arst6g01422 660 MobiDBLite consensus disorder prediction 1 37 - -
Arst6g01422 660 SMART dsp_5 40 216 IPR020422 GO:0006470|GO:0008138
Arst6g01422 660 Gene3D - 528 636 IPR012340 -
Arst6g01422 660 FunFam mRNA capping enzyme, putative 290 527 - -
Arst6g01422 660 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 139 197 IPR000387 GO:0016311|GO:0016791
Arst6g01422 660 CDD Adenylation_mRNA_capping 303 530 IPR001339 GO:0004484|GO:0005524|GO:0006370
Arst6g01422 660 SUPERFAMILY Nucleic acid-binding proteins 532 644 IPR012340 -
Arst6g01422 660 PANTHER MRNA-CAPPING ENZYME 38 631 - -
Arst6g01422 660 Pfam Dual specificity phosphatase, catalytic domain 94 215 IPR000340 GO:0008138|GO:0016311
Arst6g01422 660 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 43 231 IPR029021 -
Arst6g01422 660 MobiDBLite consensus disorder prediction 8 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01422 Arst-Chr6 14237522 14244407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01422 26 650 Protein tyrosine phosphatase (PTP) family AT3G09100 60.543 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01422 - K13917 gmx:100778292 1119.76