Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01421 ATGAGCTACCACGCGAATAGTGAAGAGGGCCGAAGAGGTTGGAAAAGGAAGCCCCCGGGAATGGAACGTTGGGGGAGAGAACAGAGGCCGTACGATACAAACTCTAGACCTTACGATAGGAACATGGTTCCTCATGGTTGGTTAGGCTGCCCACCACATGGTCAAGAATTAGGATTCATAATACCATCAAAGGTCCCACTCGGTGAATCCTTCAACGATAACATCCTAGGTCAGAAATATACTCCCAAGCAAGCAATTCTTCAGCAACGAGCTTTAGGTAGAGAACTTGGTTTAGTGCTTGATCTGACAAATACTAACCGTTACTATCCAGTTTCAGATTGGACAAAAGAAGGGATTAGTCATGTTAAGATAAGATGCAAGGGAAGAGATTCTGTGCCTGATGATGAATCTGTAAAAAAATTTTGTGACGAGGTTCTGGACTTTTGCTCCCGAAGAACAAATACAAAGAAATATATACTAGTACATTGCACACATGGGCATAACCGTACAGGTTATATGATTGTTCATTTTCTTGTGCGCACAGAATCCATTTCTGTGACTGAGGCAATAAATAGATTTGCTCAGGCTCGTTACCCAGGAATTTACAAGCAGGATTACATTGACGCCCTATATATGTTTTATCGTGAAAAGAAGCCTGAAGATCTTGTTTGTCCTCAGACTCCAGAATGGAAAAGACTTTGTGAGACAGATTTTGATGGTGCTGCTGTCCCAGCTGTAGACAACTATAGAGATGTGCCTCAGCAGGATGCTGTAGAAAATTATGGAAATGTTCCTCAGCAGGAGAATACCATGAGGAATGAAGCATTGACTAATGACGATATTTTGGGAGATTCCATTCCTTCATATCAGCTGCATACAATGCAAGAAGTTTGTTATCAACTGCTCAAACTGGGCACAGGGGGGAGAGGACGTCCGCAGTTTCCTGGATCACACCCCGTTTCTTTGAACAGTGAAAATCTACAACTCTTAAGACAGCGGTATTACTATGCCACTTGGAAAGCTGATGGAACTCGTTACATGATGCTGATTACTTTTGATGGATGTTATCTGATCGACAGAAAGTTTCTCTTCCGAAAGATCAACATGCGGTTTCCTTGCAGATACTCAAATGGGGGTACACCTGAGAAGAATCACCACTATACATTACTTGACGGGGAGATGATTATCGACATGGATCCGCATACGCATAAGCAAGAGAGAAGATACCTCATTTATGATCTGATGGCAATTAATCAAGTCTCAGTGACAGAGCTTCCATTCTACGAACGGTGGAAATTGCTGGAGAAAGAAGTAATTGAGCCTCGTAACATGGAACGAGAGGCTCTTTCCAAGAGTACAAATCCTTATTACAGATATGACTTGGAGCCATTTAGCGTGAGGAGGAAGGGGTTTTGGTTACTTTCTACCGTTTCAAAGCTCCTTCATAAATTTATTCCACAACTCTCGCATCAATCAGATGGTCTGGTGTTCCAGGGTTGGGATGATCCATATGTCCCTCGCACACACGAAGGTCTTTTGAAGTGGAAATATCCCGAGATGAACTCTGTTGACTTCCTCTGTGAGGTTGGAGCAGGTGATCGCCCCCTCCTTTATCTGTTTGAACGCGGAAGGAAGAAGTTAATGGAAGGGAATAGAGTTATTTTTAAAGATGCATCAGATATTTCTTCCTATTCAGGGAAGATCATTGAGTGCTACTGGGACGCCACAGAGCGTCACTGGGTCTGTATGAGAATCAGATTTGACAAAGCAAATCCGAATGAGATTAATACCTACAGAAAGGTAATGCGAAGCATAAAGGATAACATTACCGAAGAGTTGCTGTTGAATGAGATCAATGGAATCATTAGCCTACCCTTATATGCAGACAGAATACAAAGGGATATCAAGGCTCACCAGAACACCGTCTTGTTGCGGCGCAGATAA 1944 0.4275 MSYHANSEEGRRGWKRKPPGMERWGREQRPYDTNSRPYDRNMVPHGWLGCPPHGQELGFIIPSKVPLGESFNDNILGQKYTPKQAILQQRALGRELGLVLDLTNTNRYYPVSDWTKEGISHVKIRCKGRDSVPDDESVKKFCDEVLDFCSRRTNTKKYILVHCTHGHNRTGYMIVHFLVRTESISVTEAINRFAQARYPGIYKQDYIDALYMFYREKKPEDLVCPQTPEWKRLCETDFDGAAVPAVDNYRDVPQQDAVENYGNVPQQENTMRNEALTNDDILGDSIPSYQLHTMQEVCYQLLKLGTGGRGRPQFPGSHPVSLNSENLQLLRQRYYYATWKADGTRYMMLITFDGCYLIDRKFLFRKINMRFPCRYSNGGTPEKNHHYTLLDGEMIIDMDPHTHKQERRYLIYDLMAINQVSVTELPFYERWKLLEKEVIEPRNMEREALSKSTNPYYRYDLEPFSVRRKGFWLLSTVSKLLHKFIPQLSHQSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLCEVGAGDRPLLYLFERGRKKLMEGNRVIFKDASDISSYSGKIIECYWDATERHWVCMRIRFDKANPNEINTYRKVMRSIKDNITEELLLNEINGIISLPLYADRIQRDIKAHQNTVLLRRR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01421 647 CDD RNA_5'-triphosphatase 46 212 - -
Arst6g01421 647 FunFam mRNA capping enzyme family protein 39 252 - -
Arst6g01421 647 PIRSF mRNA_capping_HCE 30 647 IPR017074 GO:0004484|GO:0006370|GO:0140818
Arst6g01421 647 FunFam mRNA capping enzyme, putative 277 514 - -
Arst6g01421 647 Pfam mRNA capping enzyme, C-terminal domain 547 614 IPR013846 -
Arst6g01421 647 ProSitePatterns Tyrosine specific protein phosphatases active site. 161 171 IPR016130 GO:0016311|GO:0016791
Arst6g01421 647 ProSiteProfiles Dual specificity protein phosphatase domain profile. 65 220 IPR020422 GO:0006470|GO:0008138
Arst6g01421 647 CDD Adenylation_mRNA_capping 290 517 IPR001339 GO:0004484|GO:0005524|GO:0006370
Arst6g01421 647 FunFam mRNA capping enzyme family protein 515 624 - -
Arst6g01421 647 Gene3D Protein tyrosine phosphatase superfamily 20 237 IPR029021 -
Arst6g01421 647 MobiDBLite consensus disorder prediction 1 37 - -
Arst6g01421 647 Gene3D DNA ligase/mRNA capping enzyme 277 514 - -
Arst6g01421 647 SMART dsp_5 40 216 IPR020422 GO:0006470|GO:0008138
Arst6g01421 647 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 139 197 IPR000387 GO:0016311|GO:0016791
Arst6g01421 647 SUPERFAMILY Nucleic acid-binding proteins 519 631 IPR012340 -
Arst6g01421 647 PANTHER MRNA-CAPPING ENZYME 38 618 - -
Arst6g01421 647 Pfam mRNA capping enzyme, catalytic domain 318 516 IPR001339 GO:0004484|GO:0005524|GO:0006370
Arst6g01421 647 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 280 517 - -
Arst6g01421 647 Pfam Dual specificity phosphatase, catalytic domain 94 215 IPR000340 GO:0008138|GO:0016311
Arst6g01421 647 Gene3D - 515 623 IPR012340 -
Arst6g01421 647 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 43 231 IPR029021 -
Arst6g01421 647 MobiDBLite consensus disorder prediction 8 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01421 Arst-Chr6 14237522 14244407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01421 26 637 Protein tyrosine phosphatase (PTP) family AT3G09100 61.827 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01421 - K13917 gmx:100778292 1124.77