Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01405 ATGGAATCGAAAATGTCCTTTACTTCTGGAGGAACCAGTTGCCATGTTACTGGTTCAGCTGCTGAGGATGATTCAAACATGCAAGATGCTGTTGCAACTGAAGAAGGGAGTGGGAGCCAGTGGAGTTTCCTCCCAAAACCATCTCATCATAACTATGTTCAGTATCTGACTGAATCCTCAAACTATCTGCCTAAGACTGAGGATATGATTGGGAGCAATTATGCAGCTCTTGGATTTGGAAACGATGCCAATGGAACAAACATGAACTTCTTTTGTAATGATCCTGGAAAAGCTTATGCCTTTAAAACTGAAGTTCATTCTTCCAATGAAGTTGACATTGGCAAGCAAGTGGGGTATTGGAGACCTGCTGAGAGTGAAGTCCAGCAGGAAGCAATGCAATTTGAAAGTACTCAACATCATCACCCTCTCTATCCTGAGAGTCCTGCTTCATGGACACCAGAAGCAACTGGAGATAATCCTAATGTTTCACGGCTTGATCCATCAGTAATGGCTGGCACACCTAGTTTCCTTCCTAAACCAGCAAGACAGAAAGCCAGTGACCGAGTAAGTCAACAACGCAGGCAACGAATTGCTGATAATCTGAAAGCGCTACACGACTTGCTTCCAAATCAAGCAGAGGGTAGTCAAGCTTATATACTGGACGACATTATCGACCATGTTAAATATTTGCAGCTTCAATTAAAGGAACTAAGTGGAAGTAGACTACAAGCTGAATCAACTGCTATACCACTGGTTTTCCATGAGGGTTATGGGCATTATATTGACCAGCAGAAGCTGAATGAACCACTTGAAGAGATGATGGGGAAACTTCTTGAAGAGAATCCTGCATCTGCCAGTCAGCTGCTGGAGAACAATGGTCTTGTCCTGCTGCCTATGGAGTTGGTTCAAGACTTGCACCAATCCATGCAAATCTTCGGCAACAGCAATGCACTTGTCTGA 960 0.4375 MESKMSFTSGGTSCHVTGSAAEDDSNMQDAVATEEGSGSQWSFLPKPSHHNYVQYLTESSNYLPKTEDMIGSNYAALGFGNDANGTNMNFFCNDPGKAYAFKTEVHSSNEVDIGKQVGYWRPAESEVQQEAMQFESTQHHHPLYPESPASWTPEATGDNPNVSRLDPSVMAGTPSFLPKPARQKASDRVSQQRRQRIADNLKALHDLLPNQAEGSQAYILDDIIDHVKYLQLQLKELSGSRLQAESTAIPLVFHEGYGHYIDQQKLNEPLEEMMGKLLEENPASASQLLENNGLVLLPMELVQDLHQSMQIFGNSNALV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01405 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 230 IPR011598 GO:0046983
Arst6g01405 319 CDD bHLH_AtbHLH_like 188 238 IPR045239 -
Arst6g01405 319 MobiDBLite consensus disorder prediction 152 168 - -
Arst6g01405 319 MobiDBLite consensus disorder prediction 1 43 - -
Arst6g01405 319 SMART finulus 184 236 IPR011598 GO:0046983
Arst6g01405 319 MobiDBLite consensus disorder prediction 127 194 - -
Arst6g01405 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 191 245 IPR036638 GO:0046983
Arst6g01405 319 Pfam Helix-loop-helix DNA-binding domain 191 231 IPR011598 GO:0046983
Arst6g01405 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 301 - -
Arst6g01405 319 Gene3D - 179 249 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01405 Arst-Chr6 13356638 13359742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01405 193 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 39.130 8.68e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01405 - - cam:101507064 315.464