Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01401 ATGACCATATCAATGGTGTTGTGCAATCCATCAACACAACCAATCATAAATGTTCCTTGCAATGGTCCAAAACTGATCAACGCTAAGCAGAAAGAGAAGGTGGTTTTGGTCATGGGAGCAACTGGGACCGGAAAATCACGGCTCTCCATCGACCTTGGAACATGTTTTCCATCGGAAATCATCAACTCCGACAAAATTCAAGCCTATGAAGGGCTAGAAATTGCCACAAACAAGGTCACAAAGGAAGAACAACGAGGCGTGCCACATCATTTGTTAGGGATACACAATCCCTACTCTGAGTTCACGGCCAATGATTTCTGCGACATGGCCTCGTTGGCCATGGAATCAATCATTGGCCGCGAACAACTCCCGATCATAGTCGGGGGGTCGAATTCCTATGTGGAAGCATTAGTAGAAAGATTTGGATCAAGGTATGATTGGTTTTTTCTTTGGTTGGATGTATCAATGCCAATTCTTCATTCCTATGTATCGAAAAGAGTGGATGAGATGGTTGAGAAGGGAATGGTGAATGAATTAAGACCCTTTTTCAGTCCCAACGGGGATTACTCAAAAGGGATAAGAAAAGCAATTGGGGTGCCGGAATTCGACATGTTCTTTCGAAGTGAAGGGACAACATGGGATGAGAGAACGAAGCAGAGGTTGTTTGATGAGGCGATCAGGGGAGTGAAGAAGAACACGTGCACATTGGCGTGCAAGCAGTTTGAGAGGATTGAGAGGCTTAGGAATGTGAAGAGATGGAACATGCAGCGTTTGTGTGCCACAAGAGTGTTTGAAATGCATGGAAATGGTGATGATGAAGCAGATGAAGCGTGGAGGAAGATTGTGGCAGAGCCAAGTGCGAGATTAGTGGCACAGTTTCTATACAATGAAGCAATTAATAATAATAATAATAACAATAATTATTCTGGGATTAGTTCGCGTGCCAGGTTCTTCTAA 957 0.4378 MTISMVLCNPSTQPIINVPCNGPKLINAKQKEKVVLVMGATGTGKSRLSIDLGTCFPSEIINSDKIQAYEGLEIATNKVTKEEQRGVPHHLLGIHNPYSEFTANDFCDMASLAMESIIGREQLPIIVGGSNSYVEALVERFGSRYDWFFLWLDVSMPILHSYVSKRVDEMVEKGMVNELRPFFSPNGDYSKGIRKAIGVPEFDMFFRSEGTTWDERTKQRLFDEAIRGVKKNTCTLACKQFERIERLRNVKRWNMQRLCATRVFEMHGNGDDEADEAWRKIVAEPSARLVAQFLYNEAINNNNNNNNYSGISSRARFF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01401 318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 147 IPR027417 -
Arst6g01401 318 Gene3D - 31 294 IPR027417 -
Arst6g01401 318 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 156 255 - -
Arst6g01401 318 FunFam Adenylate isopentenyltransferase 5, chloroplastic 156 255 - -
Arst6g01401 318 Pfam IPP transferase 144 242 - -
Arst6g01401 318 Pfam IPP transferase 67 141 - -
Arst6g01401 318 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 293 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01401 Arst-Chr6 13352015 13353060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01401 142 298 C2H2 Transcription Factor Family AT2G27760 28.415 4.13e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01401 K10760 - gmx:100777757 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01401 6 13352015 13353060 Arst6g01401 6 13352015 13353060 ECH
Arst6g01401 6 13352015 13353060 Arst6g01401 6 13352015 13353060 PCT