Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01364 ATGACGATGATATATTACTCAAATCACAGACCCACTTATTCTCTTTCTTTTCTTCTTCTTGGCAAATTATCAAACACCTACCAGGCACCTCCAATGTCGCTCTTCATCTTCCTCTTCTTTCTCTTCCTCCTCCCGCCGCCATCGCTCTCCCAAAACGACAACGTAACCTGCCCACTCAACACCACCCTCCTCACCACCCTAGGCGGCGGCTCCGAACCATCCTTCGACTCATCCTCAACGTGTCACAACGTCCTCCAAACCCTCCACCTCCTCCAAGCCGACTACCTCCGCCGCCAATCCCGCTTCGTTCCGCCGTTAAACTCCTCCGCCTCATGCTGGTCCACCTTTCAATCCTACATCACCAAATACGAACCCAATTTCGACGTTCGCTCGCGCTGCGGCCTCCAAACCTCCTGGATCTCCTATGGCTGCATGAACATCACCACCCTCCAACAATTCGAGTCCGTCGTCCCCGCCGCAACCATCCAAAGCGTTAAAAGTAGCTGCAACCAGTCTTTGGATAACAACGCACCCTGCGCCAGCTGCACCACCAGCTTGTCCAACTTGCAGTCCTACTTGAACGGCTCCACCGTCGGCAACGTCTCCGATTGCAGGTCCTACACTTCTATCTACGCTGCTTATCTTGCTGACCCTACTGATACCGGCACCGCTAAGTGCTTGTTCGGCCTTGATTTCTCTTCCTCCGGGAAAAGCAACAACGGTAAGAAGGTTCTTATTGGTGTTGTTGTTGCTGTTTTCTTTGTTTTGGGGTTGGTTTTGTTTGGTGGGTTCTGCGGTTACTTGAGGTGGAAGAAGAAGAGGAACGAGATTACGAAGAAAGGTGGTGTTGGCATGGATCAGATTGGTTTGAGTTCTTCTGGATTGGACTCCATGAACCAGAGCACTACCTTGATTAGGTTCAGCTTCGATGAAATCAAGAGAGCCACCAGGAATTTCTCAAGGGATAACATAATTGGGAGTGGCGGTTATGGCAACGTTTACAAGGGTTTGTTGAACGATGGATCTCAGGTTGCTATGAAGAGGTTCAAGAATTGTTCTGTTGCAGGTGATGCCAGCTTCACTCATGAGGTTGAGGTCATTGCCAGCGTTAGGCATGTCAATCTTGTTGCTTTGAGAGGCTATTGTACGGCCACAACTAATTTAGAGGGTCATCAGAGGATTATTGTGACTGATTTGATGGAAAATGGGAGTCTCTATGATCACTTGTTTGGGTCAAGAGGGAAGAAATTGAGTTGGCCCCTTCGGCAGAAGATAGCTCTCGGAACTGCTAGGGGTTTGGCTTATCTGCATTACGGTGCGCAGCCGTCAATCATTCACAGGGACATTAAGGCTAGCAATATTCTTCTTGATGAGAAATTTGAGGCCAAGGTCGCAGATTTCGGGTTGGCAAAGTTCAATCCGGAGGGAATGACACATATGAGTACTAGAGTTGCCGGTACCATGGGGTATGTTGCTCCTGAGTATGCCCTCTATGGGCAATTGACAGAGAGGAGTGATGTTTTCAGCTATGGTGTCGTGCTTCTTGAATTGTTGAGTGGGAGGAAGGCTCTGGAGACGGACAGCGACGGACAGCCAAATGCACTGACTGACTTGGCCTGGTCATTGGTTAGGGAAGGTAAATCATTGGATGTTATTGAAGATGGAATGCCGGAACAGGGTGCGCCGGAGGTTCTTGAGAAGTATGTGTTGGTTGCTGTGCTGTGCTCACATCCTCAGTTGTATGCTAGGCCTACAATGGACCAGGTTGTTAAGATGCTGGAGACCGATGAGTCTGTGCCTTCGGTTATGGAAAGGCCAATACCTTTTACTGCTGGGAGGATTGATATTGAGAAATCTGCTCTAAGCAACTCAGGGCAGCTTTGTAGTCCAACCGGTTATCAGGCATTCACAATGCAGAGTAAACACCTTTCGGATCCTAATAAGCAAGAAGAGCTTAAGGAAGGAGAAGAGGGAAACTCTGAGTCCGGGACCATGAGCGTGGATTGA 2007 0.4908 MTMIYYSNHRPTYSLSFLLLGKLSNTYQAPPMSLFIFLFFLFLLPPPSLSQNDNVTCPLNTTLLTTLGGGSEPSFDSSSTCHNVLQTLHLLQADYLRRQSRFVPPLNSSASCWSTFQSYITKYEPNFDVRSRCGLQTSWISYGCMNITTLQQFESVVPAATIQSVKSSCNQSLDNNAPCASCTTSLSNLQSYLNGSTVGNVSDCRSYTSIYAAYLADPTDTGTAKCLFGLDFSSSGKSNNGKKVLIGVVVAVFFVLGLVLFGGFCGYLRWKKKRNEITKKGGVGMDQIGLSSSGLDSMNQSTTLIRFSFDEIKRATRNFSRDNIIGSGGYGNVYKGLLNDGSQVAMKRFKNCSVAGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSRGKKLSWPLRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALETDSDGQPNALTDLAWSLVREGKSLDVIEDGMPEQGAPEVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSVMERPIPFTAGRIDIEKSALSNSGQLCSPTGYQAFTMQSKHLSDPNKQEELKEGEEGNSESGTMSVD 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01364 668 CDD STKc_IRAK 325 594 - -
Arst6g01364 668 SMART serkin_6 319 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01364 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Arst6g01364 668 ProSiteProfiles Protein kinase domain profile. 319 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01364 668 Pfam SPARK 52 204 IPR043891 -
Arst6g01364 668 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 154 642 - -
Arst6g01364 668 SUPERFAMILY Protein kinase-like (PK-like) 296 594 IPR011009 -
Arst6g01364 668 MobiDBLite consensus disorder prediction 637 668 - -
Arst6g01364 668 Gene3D Transferase(Phosphotransferase) domain 1 400 604 - -
Arst6g01364 668 Gene3D Phosphorylase Kinase; domain 1 288 398 - -
Arst6g01364 668 Pfam Protein kinase domain 320 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01364 668 MobiDBLite consensus disorder prediction 644 658 - -
Arst6g01364 668 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 400 601 - -
Arst6g01364 668 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 285 398 - -
Arst6g01364 668 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01364 Arst-Chr6 12841856 12844250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01364 38 638 Receptor kinase-like Gene Family AT2G48010 62.109 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Arst6g01364 Pkinase 7.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01364 - - gmx:100786298 906.746